## @configure_input@ ## ## @file Makefile.in ## @brief Makefile template for libSBML Ruby bindings ## @author Alex Gutteridge ## @author Mike Hucka ## @author Akiya Jouraku ## ## # ----------------------------------------------------------------------------- # Configuration variables # ----------------------------------------------------------------------------- # Some of the following are substituted automatically by `configure'. If # you are looking at "Makefile", do not edit these values; instead, run the # configure script at the top level of the src tree. It will recreate # "Makefile". include @top_srcdir@/config/makefile-common-vars.mk # `srcdir' points to the current directory, but should be set by configure. # `subdir' must be set manually to the relative dir under srcdir. Don't # set `subdir' to an absolute path, or some make actions will fail. srcdir = @srcdir@ thisdir = src/bindings/ruby # `sources' are used by the default rules to determine what needs to be # compiled. sources = libsbml_wrap.cpp libsbml_wrap.h extra_sources = libsbml.i \ local-packages.i.in \ local-layout.i \ local-l3v2extendedmath.i \ local.cpp \ local.i \ local-downcast-astplugins-l3v2extendedmath.cpp \ local-downcast-astplugins.cpp.in \ local-downcast-extension-layout.cpp \ local-downcast-extension-l3v2extendedmath.cpp \ local-downcast-extension.cpp.in \ local-downcast-namespaces.cpp.in \ local-downcast-namespaces-layout.cpp \ local-downcast-namespaces-l3v2extendedmath.cpp \ local-downcast-converters.cpp.in \ local-downcast-converters-layout.cpp \ local-downcast-plugins-layout.cpp \ local-downcast-plugins-l3v2extendedmath.cpp \ local-downcast-plugins.cpp.in \ local-downcast-packages-layout.cpp \ local-downcast-packages-l3v2extendedmath.cpp \ local-downcast.cpp.in # The SWIG interface files should not need to be regenerated for recipients # of the libSBML distributions; only developers should need to regenerate # them. The conditions for this are handled later below. swig_sources = $(extra_sources) ../swig/libsbml.h ../swig/libsbml.i # What we're building is a module for use with ruby. # The libSBML Ruby API library on MacOS X has to be built as a "bundle" # rather than a .dylib library. ifeq "$(HOST_TYPE)" "darwin" platform_link_flags = -bundle libraries = libSBML.bundle # Environment variable MACOSX_DEPLOYMENT_TARGET must be set to 10.3 or later # to use -undefined dynamic_lookup. macosx_version = $(shell sw_vers -productVersion | cut -d"." -f1,2) export MACOSX_DEPLOYMENT_TARGET=${macosx_version} else libraries = libSBML.$(SHAREDLIBEXT) endif # If we're building 64-bit binaries, but are not running under 10.6, the # version of ruby will probably be 32 bit instead of 64 bit. ifdef USE_UNIVBINARY ifneq "$(MACOS_VERSION)" "10.6" ifneq "$(MACOS_VERSION)" "10.7" ifneq "$(MACOS_VERSION)" "10.8" ifneq "$(MACOS_VERSION)" "10.9" filtered_cflags = $(shell echo '$(CFLAGS)' | sed -e "s/-arch x86_64//g") filtered_cppflags = $(shell echo '$(CPPFLAGS)' | sed -e "s/-arch x86_64//g") filtered_cxxflags = $(shell echo '$(CXXFLAGS)' | sed -e "s/-arch x86_64//g") filtered_ldflags = $(shell echo '$(LDFLAGS)' | sed -e "s/-arch x86_64//g") CFLAGS := $(filtered_cflags) CPPFLAGS := $(filtered_cppflags) CXXFLAGS := $(filtered_cxxflags) LDFLAGS := $(filtered_ldflags) endif endif endif endif endif # Variables `subdirs', `headers', `sources', `libraries', `extra_CPPFLAGS', # `extra_CXXFLAGS', `extra_LDFLAGS' and `distfiles' are used by the default # rules in `makefile-common-actions.mk' included at the end. extra_CPPFLAGS += $(RUBY_CPPFLAGS) -I../swig -I../.. SWIGFLAGS += $(RUBY_CPPFLAGS) -I../swig # SBML package plug-ins ifdef USE_COMP SWIGFLAGS += -DUSE_COMP SWIGDOCDEFINES += --define USE_COMP endif # USE_COMP ifdef USE_FBC SWIGFLAGS += -DUSE_FBC SWIGDOCDEFINES += --define USE_FBC endif # USE_FBC ifdef USE_GROUPS SWIGFLAGS += -DUSE_GROUPS SWIGDOCDEFINES += --define USE_GROUPS endif # USE_GROUPS ifdef USE_LAYOUT SWIGFLAGS += -DUSE_LAYOUT SWIGDOCDEFINES += --define USE_LAYOUT endif # USE_LAYOUT ifdef USE_QUAL SWIGFLAGS += -DUSE_QUAL SWIGDOCDEFINES += --define USE_QUAL endif # USE_QUAL ifdef USE_MULTI SWIGFLAGS += -DUSE_MULTI SWIGDOCDEFINES += --define USE_MULTI endif # USE_MULTI ifdef USE_RENDER SWIGFLAGS += -DUSE_RENDER SWIGDOCDEFINES += --define USE_RENDER endif # USE_RENDER ifdef USE_L3V2EXTENDEDMATH SWIGFLAGS += -DUSE_L3V2EXTENDEDMATH SWIGDOCDEFINES += --define USE_L3V2EXTENDEDMATH endif # USE_L3V2EXTENDEDMATH # On MacOS X, compilation generates a warning about `long double'. ifeq "$(HOST_TYPE)" "darwin" ifdef HAS_GCC_WNO_LONG_DOUBLE extra_CPPFLAGS += -Wno-long-double endif endif extra_LDFLAGS += $(RUBY_LDFLAGS) extra_LIBS += $(RUBY_LIBS) ifdef USE_EXPAT extra_CPPFLAGS += @EXPAT_CPPFLAGS@ extra_LDFLAGS += @EXPAT_LDFLAGS@ extra_LIBS += @EXPAT_LIBS@ endif ifdef USE_XERCES extra_CPPFLAGS += @XERCES_CPPFLAGS@ extra_LDFLAGS += @XERCES_LDFLAGS@ extra_LIBS += @XERCES_LIBS@ endif ifdef USE_LIBXML extra_CPPFLAGS += @LIBXML_CPPFLAGS@ extra_LDFLAGS += @LIBXML_LDFLAGS@ extra_LIBS += @LIBXML_LIBS@ endif # -fno-strict-aliasing option is added to CXXFLAGS when using GCC. # As written in the SWIG Manual (section 20.2.4), SWIG generated code could cause # crash problems when compiled by GCC with -fstrict-aliasing option (automatically # enabled when using -O2 or higher optimization in GCC 3 or later) and the option # should be disabled by adding -fno-strict-aliasing option. ifeq (GCC,$(findstring GCC,$(shell $(CXX) --version))) CXXFLAGS += -fno-strict-aliasing endif # We generates a C++ library for Ruby bindings with an object file in this # directory (libsbml_wrap.o) and other object files in sub directories in # 'src' directory (src/sbml, src/common, ... ) instead of linking a shared # library of libSBML (libsbml.$(SHAREDLIBEXT)). # All directories that contain *.{c,cpp} (implementation) files of libSBML # need to be listed in the following 'otherdirs' variable. otherdirs = ../../sbml/common ../../sbml/util ../../sbml/xml \ ../../sbml/math ../../sbml/validator ../../sbml/validator/constraints \ ../../sbml/units ../../sbml/annotation ../../sbml/compress \ ../../sbml/ ../../sbml/extension ../../sbml/conversion ifdef USE_COMP otherdirs += ../../sbml/packages/comp/common \ ../../sbml/packages/comp/extension \ ../../sbml/packages/comp/sbml \ ../../sbml/packages/comp/util \ ../../sbml/packages/comp/validator \ ../../sbml/packages/comp/validator/constraints endif ifdef USE_FBC otherdirs += ../../sbml/packages/fbc/common \ ../../sbml/packages/fbc/extension \ ../../sbml/packages/fbc/sbml \ ../../sbml/packages/fbc/util \ ../../sbml/packages/fbc/validator \ ../../sbml/packages/fbc/validator/constraints endif ifdef USE_GROUPS otherdirs += ../../sbml/packages/groups/common \ ../../sbml/packages/groups/extension \ ../../sbml/packages/groups/sbml \ ../../sbml/packages/groups/validator \ ../../sbml/packages/groups/validator/constraints endif ifdef USE_LAYOUT otherdirs += ../../sbml/packages/layout/common \ ../../sbml/packages/layout/extension \ ../../sbml/packages/layout/sbml \ ../../sbml/packages/layout/util \ ../../sbml/packages/layout/validator \ ../../sbml/packages/layout/validator/constraints endif ifdef USE_QUAL otherdirs += ../../sbml/packages/qual/common \ ../../sbml/packages/qual/extension \ ../../sbml/packages/qual/sbml \ ../../sbml/packages/qual/validator \ ../../sbml/packages/qual/validator/constraints endif ifdef USE_MULTI otherdirs += ../../sbml/packages/multi/common \ ../../sbml/packages/multi/extension \ ../../sbml/packages/multi/sbml \ ../../sbml/packages/multi/validator \ ../../sbml/packages/multi/validator/constraints endif ifdef USE_RENDER otherdirs += ../../sbml/packages/render/common \ ../../sbml/packages/render/extension \ ../../sbml/packages/render/sbml \ ../../sbml/packages/render/validator \ ../../sbml/packages/render/validator/constraints endif ifdef USE_L3V2EXTENDEDMATH otherdirs += ../../sbml/packages/l3v2extendedmath/common \ ../../sbml/packages/l3v2extendedmath/extension \ ../../sbml/packages/l3v2extendedmath/validator \ ../../sbml/packages/l3v2extendedmath/validator/constraints endif objfiles = libsbml_wrap.lo $(wildcard $(addsuffix /*.lo,$(otherdirs))) # Files for test system. test_dir = test check_sources = test.rb $(wildcard $(test_dir)/**/Test*.rb) $(wildcard ruby/**/**/**/**/*.rb) $(wildcard ruby/**/**/**/*.rb) $(wildcard ruby/**/**/*.rb) $(wildcard ruby/**/*.rb) # `distfiles' determines the files and directories included in a # distribution. `distfiles_exclude' is used to filter out specific items, # so that even if they appear in `distfiles', they will not be copied in # the distribution. distfiles = Makefile.in \ CMakeLists.txt \ $(check_sources) \ $(extra_sources) \ README.txt \ $(sources) # `extra_clean' and `extra_distclean' determine the files and directories # removed during "make clean" and "make distclean". extra_clean = build $(wildcard test.xml.*) extra_distclean = \ local-downcast-extension.i local-downcast-extension.cpp \ local-downcast-namespaces.i local-downcast-namespaces.cpp \ local-packages.i local-downcast-plugins.cpp local-downcast.cpp # For Linux/Unix LD_LIBRARY_PATH *may* need to contain one or more library # paths to libsbml.so, libxerces-c.so and/or libexpat.so and/or the # libSBML.so generated by this Makfile. (For BSD/MacOS X replace # LD_LIBRARY_PATH with DYLD_LIBRARY_PATH.) # ----------------------------------------------------------------------------- # Primary build actions # ----------------------------------------------------------------------------- .SUFFIXES: .SUFFIXES: .i .cpp .o .obj .lo .la # The default action is to remake everything. ifdef USE_RUBY all: Makefile libsbml_wrap.cpp $(libraries) else all: @echo @echo "Reconfigure libSBML using --with-ruby to enable Ruby support."; @echo @exit 1 endif # Rummage through ../swig/libsbml.i to figure out the core libSBML files that # are our dependencies. main_sources = \ $(shell grep '%include sbml' ../swig/libsbml.i | grep -v 'libsbml-version.h' \ | cut -f2- -d'/' | sed -e 's,^,../../sbml/,g') # Recreate SWIG files when one of the following conditions is true: # # (1) libsbml_wrap.cpp does not exist # (2) libsbml_wrap.cpp exists, but the file is not consistent with the # current USE_LAYOUT, USE_COMP, etc., values. # # If the last run was made with a package flag like --enable-layout, and this # run isn't, or vice-versa, the swig wrap files will be wrong for this run. # However, you can't tell just by looking at file mod times, so you can't use # normal make dependencies. So we do this grungy trick of looking inside # libsbml_wrap.cpp to see what's inside. # # The check_foo macros works as follows. They return a non-empty string # "do_reswig" if re-swig'ing is called for, and this string is a phony make # target declared below. When check_layout is used as a dependency of # libsbml_wrap.cpp via a call like this, # # libsbml_wrap.cpp: $(shell $(call check_layout)) ...other dependencies... # ...ACTIONS... # # what will happen is either check_layout will return nothing, in which # case the dependency is satisfied and no swig'ing needs to be done, or # it will return "do_reswig", a phony target that is never satisfied, # in which case the ...ACTIONS... will be executed. .PHONY: do_reswig ifdef USE_COMP define check_comp if test ! -f libsbml_wrap.cpp; then echo "do_reswig"; exit; fi; \ if test -z "`grep getListOfSubmodels libsbml_wrap.cpp`"; then echo "do_reswig"; fi; endef else define check_comp if test ! -f libsbml_wrap.cpp; then echo "do_reswig"; exit; fi; \ if test -n "`grep getListOfSubmodels libsbml_wrap.cpp`"; then echo "do_reswig"; fi; endef endif ifdef USE_FBC define check_fbc if test ! -f libsbml_wrap.cpp; then echo "do_reswig"; exit; fi; \ if test -z "`grep ListOfFluxBounds libsbml_wrap.cpp`"; then echo "do_reswig"; fi; endef else define check_fbc if test ! -f libsbml_wrap.cpp; then echo "do_reswig"; exit; fi; \ if test -n "`grep ListOfFluxBounds libsbml_wrap.cpp`"; then echo "do_reswig"; fi; endef endif ifdef USE_GROUPS define check_groups if test ! -f libsbml_wrap.cpp; then echo "do_reswig"; exit; fi; \ if test -z "`grep ListOfGroups libsbml_wrap.cpp`"; then echo "do_reswig"; fi; endef else define check_groups if test ! -f libsbml_wrap.cpp; then echo "do_reswig"; exit; fi; \ if test -n "`grep ListOfGroups libsbml_wrap.cpp`"; then echo "do_reswig"; fi; endef endif ifdef USE_LAYOUT define check_layout if test ! -f libsbml_wrap.cpp; then echo "do_reswig"; exit; fi; \ if test -z "`grep getListOfLayouts libsbml_wrap.cpp`"; then echo "do_reswig"; fi; endef else define check_layout if test ! -f libsbml_wrap.cpp; then echo "do_reswig"; exit; fi; \ if test -n "`grep getListOfLayouts libsbml_wrap.cpp`"; then echo "do_reswig"; fi; endef endif ifdef USE_QUAL define check_qual if test ! -f libsbml_wrap.cpp; then echo "do_reswig"; exit; fi; \ if test -z "`grep ListOfQualitativeSpecies libsbml_wrap.cpp`"; then echo "do_reswig"; fi; endef else define check_qual if test ! -f libsbml_wrap.cpp; then echo "do_reswig"; exit; fi; \ if test -n "`grep ListOfQualitativeSpecies libsbml_wrap.cpp`"; then echo "do_reswig"; fi; endef endif ifdef USE_MULTI define check_multi if test ! -f libsbml_wrap.cpp; then echo "do_reswig"; exit; fi; \ if test -z "`grep ListOfSpeciesFeatures libsbml_wrap.cpp`"; then echo "do_reswig"; fi; endef else define check_multi if test ! -f libsbml_wrap.cpp; then echo "do_reswig"; exit; fi; \ if test -n "`grep ListOfSpeciesFeatures libsbml_wrap.cpp`"; then echo "do_reswig"; fi; endef endif ifdef USE_RENDER define check_render if test ! -f libsbml_wrap.cpp; then echo "do_reswig"; exit; fi; \ if test -z "`grep ListOfGlobalRenderInformation libsbml_wrap.cpp`"; then echo "do_reswig"; fi; endef else define check_render if test ! -f libsbml_wrap.cpp; then echo "do_reswig"; exit; fi; \ if test -n "`grep ListOfGlobalRenderInformation libsbml_wrap.cpp`"; then echo "do_reswig"; fi; endef endif ifdef USE_L3V2EXTENDEDMATH define check_l3v2extendedmath if test ! -f LibSBML_wrap.cxx; then echo "do_reswig"; exit; fi; endef else define check_l3v2extendedmath if test ! -f LibSBML_wrap.cxx; then echo "do_reswig"; exit; fi; endef endif libsbml_wrap.cpp: $(swig_sources) $(main_sources) \ $(shell $(call check_comp)) $(shell $(call check_fbc)) \ $(shell $(call check_layout)) $(shell $(call check_qual)) \ $(shell $(call check_groups)) $(shell $(call check_multi)) \ $(shell $(call check_render)) $(shell $(call check_l3v2extendedmath)) @top_srcdir@/config/chk_swig_version.sh || exit $(SWIG) $(SWIGFLAGS) $(sort $(default_includes) $(INCLUDES)) \ -c++ -ruby -o libsbml_wrap.cpp libsbml.i # ----------------------------------------------------------------------------- # Checking. # ----------------------------------------------------------------------------- check: $(libraries) $(shell $(call check_layout)) \ $(shell $(call check_comp)) $(shell $(call check_fbc)) \ $(shell $(call check_qual)) $(shell $(call check_groups)) \ $(shell $(call check_multi)) $(shell $(call check_render)) \ $(shell $(call check_l3v2extendedmath)) @echo @echo @echo Running Tests in $(thisdir) @echo ----------------------------------------------------------------- $(call libsbmlrun, $(RUBY) -I./ -I./ruby test.rb) @echo ----------------------------------------------------------------- @echo # # 'make test-files' will reconstruct the test files. This is not made part # of 'make check' (yet). # test-files: $(call test_translator,r,xml math annotation sbml,test) # ----------------------------------------------------------------------------- # Installation. # ----------------------------------------------------------------------------- install: archdir=$(RUBY_INSTALL_DIR); \ for i in $(libraries); do \ $(MKINSTALLDIRS) $(DESTDIR)$$archdir; \ $(INSTALL_SH) $$i $(DESTDIR)$$archdir/$$i; \ done ; \ installcheck: uninstall: -archdir=$(RUBY_INSTALL_DIR); \ for i in $(libraries); do \ rm $(DESTDIR)$$archdir/$$i; \ done ; \ # ----------------------------------------------------------------------------- # Creating distribution (for libSBML maintainers only) # ----------------------------------------------------------------------------- dist: libsbml_wrap.cpp dist-normal distcheck: distcheck-normal # ----------------------------------------------------------------------------- # Miscellaneous # ----------------------------------------------------------------------------- include @top_srcdir@/config/makefile-common-actions.mk # ----------------------------------------------------------------------------- # End. # -----------------------------------------------------------------------------