Lines Matching refs:cram
51 $(HTSDIR)/htslib/cram.h \
109 $(HTSDIR)/cram/cram.h \
110 $(HTSDIR)/cram/cram_codecs.c \
111 $(HTSDIR)/cram/cram_codecs.h \
112 $(HTSDIR)/cram/cram_decode.c \
113 $(HTSDIR)/cram/cram_decode.h \
114 $(HTSDIR)/cram/cram_encode.c \
115 $(HTSDIR)/cram/cram_encode.h \
116 $(HTSDIR)/cram/cram_external.c \
117 $(HTSDIR)/cram/cram_index.c \
118 $(HTSDIR)/cram/cram_index.h \
119 $(HTSDIR)/cram/cram_io.c \
120 $(HTSDIR)/cram/cram_io.h \
121 $(HTSDIR)/cram/cram_samtools.c \
122 $(HTSDIR)/cram/cram_samtools.h \
123 $(HTSDIR)/cram/cram_stats.c \
124 $(HTSDIR)/cram/cram_stats.h \
125 $(HTSDIR)/cram/cram_structs.h \
126 $(HTSDIR)/cram/files.c \
127 $(HTSDIR)/cram/mFILE.c \
128 $(HTSDIR)/cram/mFILE.h \
129 $(HTSDIR)/cram/misc.h \
130 $(HTSDIR)/cram/open_trace_file.c \
131 $(HTSDIR)/cram/open_trace_file.h \
132 $(HTSDIR)/cram/os.h \
133 $(HTSDIR)/cram/pooled_alloc.c \
134 $(HTSDIR)/cram/pooled_alloc.h \
135 $(HTSDIR)/cram/rANS_byte.h \
136 $(HTSDIR)/cram/rANS_static.c \
137 $(HTSDIR)/cram/rANS_static.h \
138 $(HTSDIR)/cram/sam_header.c \
139 $(HTSDIR)/cram/sam_header.h \
140 $(HTSDIR)/cram/string_alloc.c \
141 $(HTSDIR)/cram/string_alloc.h \
142 $(HTSDIR)/cram/vlen.c \
143 $(HTSDIR)/cram/vlen.h \
144 $(HTSDIR)/cram/zfio.c \
145 $(HTSDIR)/cram/zfio.h