102     unsigned qlength() const ///< effects how many bases of the query sequence  in qlength()  function
196     int qlength; ///< aligned length of query  member
200 …CIGAR(unsigned rlength, unsigned left_clip, unsigned qlength, unsigned right_clip, std::vector<CIG…  in CIGAR()
201     : qlength(qlength)  in CIGAR()
209     : qlength(0)  in CIGAR()
215     : qlength(0)  in CIGAR()
278             qlength = qfirst + qclip;  in CIGAR()
287                         qlength += length;  in CIGAR()
299         qclip = qfirst = qlength = rlength = 0;  in CIGAR()
315         return CIGAR(rlength, qclip, qlength, qfirst, std::vector<CIGAR_OP>(rbegin(), rend()));  in adjoint()
371         return (spos < cigar.qfirst) || (spos > cigar.qfirst + cigar.qlength);  in isClipped()
423 …      auto const length = detail[i].cigar.qlength - detail[i].cigar.qfirst - detail[i].cigar.qclip;  in sequence()