Lines Matching refs:htParams
2479 public Map<String, Object> setLoadParameters(Map<String, Object> htParams, in setLoadParameters() argument
2481 if (htParams == null) in setLoadParameters()
2482 htParams = new Hashtable<String, Object>(); in setLoadParameters()
2483 htParams.put("vwr", this); in setLoadParameters()
2485 htParams.put("atomTypes", g.atomTypes); in setLoadParameters()
2486 if (!htParams.containsKey("lattice")) in setLoadParameters()
2487 htParams.put("lattice", g.ptDefaultLattice); in setLoadParameters()
2489 htParams.put("applySymmetryToBonds", Boolean.TRUE); in setLoadParameters()
2491 htParams.put("getHeader", Boolean.TRUE); in setLoadParameters()
2493 htParams.put("isSequential", Boolean.TRUE); in setLoadParameters()
2495 htParams.put("legacyJavaFloat", Boolean.TRUE); in setLoadParameters()
2496 htParams.put("stateScriptVersionInt", in setLoadParameters()
2498 if (!htParams.containsKey("filter")) { in setLoadParameters()
2501 htParams.put("filter", filter); in setLoadParameters()
2504 htParams.put("baseAtomIndex", Integer.valueOf(isAppend ? ms.ac : 0)); in setLoadParameters()
2505 htParams.put("baseBondIndex", Integer.valueOf(isAppend ? ms.bondCount : 0)); in setLoadParameters()
2506 htParams.put("baseModelIndex", in setLoadParameters()
2509 htParams.put("merging", Boolean.TRUE); in setLoadParameters()
2510 return htParams; in setLoadParameters()
2671 Map<String, Object> htParams, SB loadScript, in loadModelFromFile() argument
2673 if (htParams == null) in loadModelFromFile()
2674 htParams = setLoadParameters(null, isAppend); in loadModelFromFile()
2676 htParams.put("dataType", T.nameOf(tokType)); in loadModelFromFile()
2678 htParams.put("concatenate", Boolean.TRUE); in loadModelFromFile()
2698 setLoadParameters(htParams, isAppend), isAppend); in loadModelFromFile()
2701 fileNames = (String[]) htParams.get("fullPathNames"); in loadModelFromFile()
2702 String[] fileTypes = (String[]) htParams.get("fileTypes"); in loadModelFromFile()
2721 atomSetCollection = openFileFull(fileName, isAppend, htParams, in loadModelFromFile()
2730 fileName, reader, setLoadParameters(htParams, isAppend)); in loadModelFromFile()
2737 setLoadParameters(htParams, isAppend)); in loadModelFromFile()
2748 if (htParams.containsKey("isData")) in loadModelFromFile()
2753 String fname = (String) htParams.get("fullPathName"); in loadModelFromFile()
2757 if (htParams.containsKey("loadScript")) in loadModelFromFile()
2758 loadScript = (SB) htParams.get("loadScript"); in loadModelFromFile()
2759 htParams.put("loadScript", in loadModelFromFile()
2767 htParams); in loadModelFromFile()
2860 Map<String, Object> htParams = new Hashtable<String, Object>(); in getLigandModel() local
2861 htParams.put("modelOnly", Boolean.TRUE); in getLigandModel()
2863 Rdr.getBR(data), htParams); in getLigandModel()
2894 Map<String, Object> htParams, SB loadScript) { in openFileFull() argument
2904 htParams = setLoadParameters(htParams, isAppend); in openFileFull()
2906 boolean haveFileData = (htParams.containsKey("fileData")); in openFileFull()
2908 htParams.put("smilesString", fileName.substring(1)); in openFileFull()
2913 strModel = (String) htParams.get("fileData"); in openFileFull()
2914 if (htParams.containsKey("isData")) { in openFileFull()
2915 Object o = loadInlineScript(strModel, '\0', isAppend, htParams); in openFileFull()
2928 htParams.put("loadScript", in openFileFull()
2938 (Integer) htParams.get("appendToModelIndex"), in openFileFull()
2941 htParams, isAppend); in openFileFull()
2947 atomSetCollection = fm.createAtomSetCollectionFromFile(fileName, htParams, in openFileFull()
3071 Map<String, Object> htParams) { in loadInlineScript() argument
3097 return openStringsInlineParamsAppend(strModels, htParams, isAppend); in loadInlineScript()
3099 return openStringInlineParamsAppend(strModel, htParams, isAppend); in loadInlineScript()
3140 Map<String, Object> htParams, in openStringInlineParamsAppend() argument
3151 htParams = setLoadParameters(htParams, isAppend); in openStringInlineParamsAppend()
3152 SB loadScript = (SB) htParams.get("loadScript"); in openStringInlineParamsAppend()
3153 boolean isLoadCommand = htParams.containsKey("isData"); in openStringInlineParamsAppend()
3160 (Integer) htParams.get("appendToModelIndex"), g.defaultLoadFilter); in openStringInlineParamsAppend()
3162 htParams, isAppend); in openStringInlineParamsAppend()
3164 htParams); in openStringInlineParamsAppend()
3176 Map<String, Object> htParams, in openStringsInlineParamsAppend() argument
3183 loadScript, setLoadParameters(htParams, isAppend), isAppend); in openStringsInlineParamsAppend()
3185 htParams); in openStringsInlineParamsAppend()
3213 Map<String, Object> htParams) { in createModelSetAndReturnError() argument
3251 JmolScriptEvaluator eval = (JmolScriptEvaluator) htParams in createModelSetAndReturnError()
3286 errMsg, (Boolean) htParams.get("async")); in createModelSetAndReturnError()
3601 private void loadDefaultModelKitModel(Map<String, Object> htParams) { in loadDefaultModelKitModel() argument
3602 openStringInlineParamsAppend(getModelkit(false).getDefaultModel(), htParams, true); in loadDefaultModelKitModel() local
7268 Map<String, Object> htParams = new Hashtable<String, Object>(); in setModelKitMode() local
7269 htParams.put("appendToModelIndex", Integer.valueOf(am.cmi)); in setModelKitMode()
7270 loadDefaultModelKitModel(htParams); in setModelKitMode()
10096 Map<String, Object> htParams = new Hashtable<String, Object>(); in startNBO() local
10097 htParams.put("service", "nbo"); in startNBO()
10098 htParams.put("action", "showPanel"); in startNBO()
10099 htParams.put("options", options); in startNBO()
10100 sm.processService(htParams); in startNBO()