/* This software was developed by Bruce Hendrickson and Robert Leland * * at Sandia National Laboratories under US Department of Energy * * contract DE-AC04-76DP00789 and is copyrighted by Sandia Corporation. */ #include #include "params.h" #include "defs.h" #include "structs.h" int DEBUG_COVER = 0; /* Debug output in min vtx cover routines? */ int FLATTEN = FALSE; /* Merge indistinguishable vtxs first? */ int COARSE_KLV = TRUE; /* Use KLV as multilevel refinement? */ int COARSE_BPM = FALSE; /* Use vertex cover as ML refinement? */ int VERTEX_COVER = 0; /* Do vertex cover to refine separator? */ /* Once, or iteratively? */ void coarsen_klv(graph, nvtxs, nedges, using_vwgts, using_ewgts, term_wgts, igeom, coords, vwgt_max, assignment, goal, architecture, hops, solver_flag, ndims, nsets, vmax, mediantype, mkconnected, eigtol, nstep, step, pbndy_list, weights, give_up) /* Coarsen until nvtxs < vmax, compute and uncoarsen. */ struct vtx_data **graph; /* array of vtx data for graph */ int nvtxs; /* number of vertices in graph */ int nedges; /* number of edges in graph */ int using_vwgts; /* are vertices weights being used? */ int using_ewgts; /* are edge weights being used? */ float *term_wgts[]; /* weights for terminal propogation */ int igeom; /* dimension for geometric information */ float **coords; /* coordinates for vertices */ int vwgt_max; /* largest vertex weight */ short *assignment; /* processor each vertex gets assigned to */ double *goal; /* desired set sizes */ int architecture; /* 0 => hypercube, d => d-dimensional mesh */ short (*hops)[MAXSETS]; /* cost of edge between sets */ int solver_flag; /* which eigensolver to use */ int ndims; /* number of eigenvectors to calculate */ int nsets; /* number of sets being divided into */ int vmax; /* largest subgraph to stop coarsening */ int mediantype; /* flag for different assignment strategies */ int mkconnected; /* enforce connectivity before eigensolve? */ double eigtol; /* tolerence in eigen calculation */ int nstep; /* number of coarsenings between RQI steps */ int step; /* current step number */ int **pbndy_list; /* pointer to returned boundary list */ double *weights; /* weights of vertices in each set */ int give_up; /* has coarsening bogged down? */ { extern FILE *Output_File; /* output file or null */ extern int DEBUG_TRACE; /* trace the execution of the code */ extern int DEBUG_COARSEN; /* debug flag for coarsening */ extern int DEBUG_CONNECTED; /* debug flag for connectivity checking */ extern double COARSEN_RATIO_MIN; /* vtx reduction demanded */ extern int COARSEN_VWGTS; /* use vertex weights while coarsening? */ extern int COARSEN_EWGTS; /* use edge weights while coarsening? */ extern int COARSE_KL_BOTTOM;/* force KL invocation at bottom level? */ extern int LIMIT_KL_EWGTS; /* limit edges weights in KL? */ extern int COARSE_KLV; /* apply klv as a smoother? */ extern int COARSE_BPM; /* apply bipartite matching/flow as a smoother? */ extern double KL_IMBALANCE; /* fractional imbalance allowed in KL */ struct connect_data *cdata; /* data structure for enforcing connectivity */ struct vtx_data **cgraph; /* array of vtx data for coarsened graph */ double *yvecs[MAXDIMS + 1]; /* eigenvectors for subgraph */ double evals[MAXDIMS + 1]; /* eigenvalues returned */ double new_goal[MAXSETS];/* new goal if not using vertex weights */ double *real_goal; /* chooses between goal and new_goal */ double goal_weight; /* total weight of vertices in goal */ double *vwsqrt = NULL; /* square root of vertex weights */ double maxdeg; /* maximum weighted degree of a vertex */ float *cterm_wgts[MAXSETS]; /* terminal weights for coarse graph */ float *new_term_wgts[MAXSETS]; /* modified for Bui's method */ float **real_term_wgts; /* which of previous two to use */ float ewgt_max; /* largest edge weight in graph */ float *twptr; /* loops through term_wgts */ float *twptr_save; /* copy of twptr */ float *ctwptr; /* loops through cterm_wgts */ float **ccoords; /* coarse graph coordinates */ int *active; /* space for assign routine */ int *v2cv; /* mapping from vtxs to coarse vtxs */ int *flag; /* scatter array for coarse bndy vtxs */ int *bndy_list; /* list of vertices on boundary */ int *cbndy_list; /* list of vertices of coarse graph on boundary */ short *cassignment; /* set assignments for coarsened vertices */ int flattened; /* was this graph flattened? */ int list_length; /* length of boundary vtx list */ int cnvtxs; /* number of vertices in coarsened graph */ int cnedges; /* number of edges in coarsened graph */ int cvwgt_max; /* largest vertex weight in coarsened graph */ int nextstep; /* next step in RQI test */ int max_dev; /* largest allowed deviation from balance */ int i, j; /* loop counters */ int sfree(), find_bndy(), flatten(); double *smalloc(), find_maxdeg(); void makevwsqrt(), make_connected(), print_connected(), eigensolve(); void make_unconnected(), assign(), klvspiff(), coarsen1(), free_graph(); void compress_ewgts(), restore_ewgts(), count_weights(), bpm_improve(); if (DEBUG_COARSEN > 0 || DEBUG_TRACE > 0) { printf("\n", step, nvtxs, nedges, vmax); } /* Is problem small enough to solve? */ if (nvtxs <= vmax || give_up) { /* Starting here, everything could be replaced by simple partitioner */ /* coded w/ few lines below. */ /* if (using_vwgts) { vwsqrt = (double *) smalloc((unsigned) (nvtxs + 1) * sizeof(double)); makevwsqrt(vwsqrt, graph, nvtxs); } else vwsqrt = NULL; /* Create space for subgraph yvecs. */ /* for (i = 1; i <= ndims; i++) { yvecs[i] = (double *) smalloc((unsigned) (nvtxs + 1) * sizeof(double)); } active = (int *) smalloc((unsigned) nvtxs * sizeof(int)); if (mkconnected) { make_connected(graph, nvtxs, &nedges, (short *) &(yvecs[1][0]), active, &cdata, using_ewgts); if (DEBUG_CONNECTED > 0) { printf("Enforcing connectivity on coarse graph\n"); print_connected(cdata); } } /* If not coarsening ewgts, then need care with term_wgts. */ /* if (!using_ewgts && term_wgts[1] != NULL && step != 0) { twptr = (float *) smalloc((unsigned) (nvtxs + 1) * (nsets - 1) * sizeof(float)); twptr_save = twptr; for (j = 1; j < nsets; j++) { new_term_wgts[j] = twptr; twptr += nvtxs + 1; } for (j = 1; j < nsets; j++) { twptr = term_wgts[j]; ctwptr = new_term_wgts[j]; for (i = 1; i <= nvtxs; i++) { if (twptr[i] > .5) ctwptr[i] = 1; else if (twptr[i] < -.5) ctwptr[i] = -1; else ctwptr[i] = 0; } } real_term_wgts = new_term_wgts; } else { real_term_wgts = term_wgts; new_term_wgts[1] = NULL; } /* Partition coarse graph with spectral method */ /* maxdeg = find_maxdeg(graph, nvtxs, using_ewgts, &ewgt_max); eigensolve(graph, nvtxs, nedges, maxdeg, vwgt_max, vwsqrt, using_vwgts, using_ewgts, real_term_wgts, 0, (float **) NULL, yvecs, evals, architecture, assignment, goal, solver_flag, FALSE, 0, ndims, mediantype, eigtol); if (mkconnected) make_unconnected(graph, &nedges, &cdata, using_ewgts); if (!COARSEN_VWGTS && step != 0) { /* Construct new goal */ /* goal_weight = 0; for (i = 0; i < nsets; i++) goal_weight += goal[i]; for (i = 0; i < nsets; i++) new_goal[i] = goal[i] * (nvtxs / goal_weight); real_goal = new_goal; } else real_goal = goal; assign(graph, yvecs, nvtxs, ndims, architecture, nsets, vwsqrt, assignment, active, mediantype, real_goal, vwgt_max); sfree((char *) active); /* Check for boundary and flag those guys with a 2 */ /* list_length = find_bndy(graph, nvtxs, assignment, 2, &bndy_list); count_weights(graph, nvtxs, assignment, nsets + 1, weights, (vwgt_max != 1)); if (COARSE_KL_BOTTOM || !(step % nstep)) { if (LIMIT_KL_EWGTS) { find_maxdeg(graph, nvtxs, using_ewgts, &ewgt_max); compress_ewgts(graph, nvtxs, nedges, ewgt_max, using_ewgts); } max_dev = (step == 0) ? vwgt_max : 5 * vwgt_max; goal_weight = 0; for (i = 0; i < nsets; i++) { goal_weight += real_goal[i]; } goal_weight *= KL_IMBALANCE / nsets; if (goal_weight > max_dev) { max_dev = goal_weight; } if (COARSE_KLV) { klvspiff(graph, nvtxs, assignment, real_goal, max_dev, &bndy_list, weights); } if (COARSE_BPM) { bpm_improve(graph, assignment, real_goal, max_dev, &bndy_list, weights, using_vwgts); } if (LIMIT_KL_EWGTS) restore_ewgts(graph, nvtxs); } if (real_term_wgts != term_wgts && new_term_wgts[1] != NULL) { sfree((char *) real_term_wgts[1]); } if (vwsqrt != NULL) sfree((char *) vwsqrt); for (i = ndims; i > 0; i--) sfree((char *) yvecs[i]); real_goal = goal; */ /* The following could replace everything above. */ /* */ real_goal = goal; simple_part(graph, nvtxs, assignment, nsets, 1, real_goal); list_length = find_bndy(graph, nvtxs, assignment, 2, &bndy_list); count_weights(graph, nvtxs, assignment, nsets + 1, weights, 1); max_dev = (step == 0) ? vwgt_max : 5 * vwgt_max; goal_weight = 0; for (i = 0; i < nsets; i++) goal_weight += real_goal[i]; goal_weight *= KL_IMBALANCE / nsets; if (goal_weight > max_dev) max_dev = goal_weight; if (COARSE_KLV) { klvspiff(graph, nvtxs, assignment, real_goal, max_dev, &bndy_list, weights); } if (COARSE_BPM) { bpm_improve(graph, assignment, real_goal, max_dev, &bndy_list, weights, using_vwgts); } /* */ *pbndy_list = bndy_list; return; } /* Otherwise I have to coarsen. */ flattened = FALSE; if (coords != NULL) { ccoords = (float **) smalloc((unsigned) igeom * sizeof(float *)); } else { ccoords = NULL; } if (FLATTEN && step == 0) { flattened = flatten(graph, nvtxs, nedges, &cgraph, &cnvtxs, &cnedges, &v2cv, using_ewgts && COARSEN_EWGTS, igeom, coords, ccoords); } if (!flattened) { coarsen1(graph, nvtxs, nedges, &cgraph, &cnvtxs, &cnedges, &v2cv, igeom, coords, ccoords, using_ewgts && COARSEN_EWGTS); } if (term_wgts[1] != NULL) { twptr = (float *) smalloc((unsigned) (cnvtxs + 1) * (nsets - 1) * sizeof(float)); twptr_save = twptr; for (i = (cnvtxs + 1) * (nsets - 1); i; i--) { *twptr++ = 0; } twptr = twptr_save; for (j = 1; j < nsets; j++) { cterm_wgts[j] = twptr; twptr += cnvtxs + 1; } for (j = 1; j < nsets; j++) { ctwptr = cterm_wgts[j]; twptr = term_wgts[j]; for (i = 1; i < nvtxs; i++) { ctwptr[v2cv[i]] += twptr[i]; } } } else { cterm_wgts[1] = NULL; } /* If coarsening isn't working very well, give up and partition. */ give_up = FALSE; if (nvtxs * COARSEN_RATIO_MIN < cnvtxs && cnvtxs > vmax && !flattened) { printf("WARNING: Coarsening not making enough progress, nvtxs = %d, cnvtxs = %d.\n", nvtxs, cnvtxs); printf(" Recursive coarsening being stopped prematurely.\n"); if (Output_File != NULL) { fprintf(Output_File, "WARNING: Coarsening not making enough progress, nvtxs = %d, cnvtxs = %d.\n", nvtxs, cnvtxs); fprintf(Output_File, " Recursive coarsening being stopped prematurely.\n"); } give_up = TRUE; } /* Now recurse on coarse subgraph. */ if (COARSEN_VWGTS) { cvwgt_max = 0; for (i = 1; i <= cnvtxs; i++) { if (cgraph[i]->vwgt > cvwgt_max) cvwgt_max = cgraph[i]->vwgt; } } else cvwgt_max = 1; cassignment = (short *) smalloc((unsigned) (cnvtxs + 1) * sizeof(short)); if (flattened) nextstep = step; else nextstep = step + 1; coarsen_klv(cgraph, cnvtxs, cnedges, COARSEN_VWGTS, COARSEN_EWGTS, cterm_wgts, igeom, ccoords, cvwgt_max, cassignment, goal, architecture, hops, solver_flag, ndims, nsets, vmax, mediantype, mkconnected, eigtol, nstep, nextstep, &cbndy_list, weights, give_up); /* Interpolate assignment back to fine graph. */ for (i = 1; i <= nvtxs; i++) { assignment[i] = cassignment[v2cv[i]]; } /* Construct boundary list from coarse boundary list. */ flag = (int *) smalloc((unsigned) (cnvtxs + 1) * sizeof(int)); for (i = 1; i <= cnvtxs; i++) { flag[i] = FALSE; } for (i = 0; cbndy_list[i]; i++) { flag[cbndy_list[i]] = TRUE; } list_length = 0; for (i = 1; i <= nvtxs; i++) { if (flag[v2cv[i]]) ++list_length; } bndy_list = (int *) smalloc((unsigned) (list_length + 1) * sizeof(int)); list_length = 0; for (i = 1; i <= nvtxs; i++) { if (flag[v2cv[i]]) bndy_list[list_length++] = i; } bndy_list[list_length] = 0; sfree((char *) flag); sfree((char *) cbndy_list); /* Free the space that was allocated. */ sfree((char *) cassignment); if (cterm_wgts[1] != NULL) sfree((char *) cterm_wgts[1]); free_graph(cgraph); sfree((char *) v2cv); /* Smooth using KL or BPM every nstep steps. */ if (!(step % nstep) && !flattened) { /* if (!(step % nstep)) { */ if (!COARSEN_VWGTS && step != 0) { /* Construct new goal */ goal_weight = 0; for (i = 0; i < nsets; i++) goal_weight += goal[i]; for (i = 0; i < nsets; i++) new_goal[i] = goal[i] * (nvtxs / goal_weight); real_goal = new_goal; } else real_goal = goal; if (LIMIT_KL_EWGTS) { find_maxdeg(graph, nvtxs, using_ewgts, &ewgt_max); compress_ewgts(graph, nvtxs, nedges, ewgt_max, using_ewgts); } /* If not coarsening ewgts, then need care with term_wgts. */ if (!using_ewgts && term_wgts[1] != NULL && step != 0) { twptr = (float *) smalloc((unsigned) (nvtxs + 1) * (nsets - 1) * sizeof(float)); twptr_save = twptr; for (j = 1; j < nsets; j++) { new_term_wgts[j] = twptr; twptr += nvtxs + 1; } for (j = 1; j < nsets; j++) { twptr = term_wgts[j]; ctwptr = new_term_wgts[j]; for (i = 1; i <= nvtxs; i++) { if (twptr[i] > .5) ctwptr[i] = 1; else if (twptr[i] < -.5) ctwptr[i] = -1; else ctwptr[i] = 0; } } real_term_wgts = new_term_wgts; } else { real_term_wgts = term_wgts; new_term_wgts[1] = NULL; } max_dev = (step == 0) ? vwgt_max : 5 * vwgt_max; goal_weight = 0; for (i = 0; i < nsets; i++) { goal_weight += real_goal[i]; } goal_weight *= KL_IMBALANCE / nsets; if (goal_weight > max_dev) { max_dev = goal_weight; } if (!COARSEN_VWGTS) { count_weights(graph, nvtxs, assignment, nsets + 1, weights, (vwgt_max != 1)); } if (COARSE_KLV) { /* printf("Before KLV"); print_sep_size(bndy_list, graph); */ klvspiff(graph, nvtxs, assignment, real_goal, max_dev, &bndy_list, weights); } if (COARSE_BPM) { /* printf("Before BPM"); print_sep_size(bndy_list, graph); */ bpm_improve(graph, assignment, real_goal, max_dev, &bndy_list, weights, using_vwgts); } /* printf("Returning"); print_sep_size(bndy_list, graph); */ if (real_term_wgts != term_wgts && new_term_wgts[1] != NULL) { sfree((char *) real_term_wgts[1]); } if (LIMIT_KL_EWGTS) restore_ewgts(graph, nvtxs); } *pbndy_list = bndy_list; /* Free the space that was allocated. */ if (ccoords != NULL) { for (i = 0; i < igeom; i++) sfree((char *) ccoords[i]); sfree((char *) ccoords); } if (DEBUG_COARSEN > 0) { printf(" Leaving coarsen_klv, step=%d\n", step); } } void print_sep_size(list, graph) int *list; struct vtx_data **graph; /* array of vtx data for graph */ { int sep_size, sep_weight; int i; sep_size = sep_weight = 0; for (i = 0; list[i] != 0; i++) { sep_size++; sep_weight += graph[list[i]]->vwgt; } printf(" Sep_size = %d, Sep_weight = %d\n", sep_size, sep_weight); }