| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/sbml/test/ |
| H A D | TestReadFromFile2.c | 62 SBMLDocument_t *d; in START_TEST() local
65 KineticLaw_t *kl; in START_TEST() local
67 Reaction_t *r; in START_TEST() local
68 Species_t *s; in START_TEST() local
370 KineticLaw_t *kl; in START_TEST() local
372 Reaction_t *r; in START_TEST() local
373 Species_t *s; in START_TEST() local
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| H A D | TestReadFromFile1.c | 62 SBMLDocument_t *d; in START_TEST() local
65 KineticLaw_t *kl; in START_TEST() local
67 Reaction_t *r; in START_TEST() local
68 Species_t *s; in START_TEST() local
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| H A D | TestReadFromFile3.c | 62 SBMLDocument_t *d; in START_TEST() local
65 KineticLaw_t *kl; in START_TEST() local
68 Reaction_t *r; in START_TEST() local
69 Species_t *s; in START_TEST() local
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| H A D | TestSBMLConvert.c | 85 KineticLaw_t *kl = Reaction_createKineticLaw(r); in START_TEST() local
282 Species_t *s = in START_TEST() local
555 Species_t *s = Model_createSpecies(m); in START_TEST() local
563 KineticLaw_t *kl = Reaction_createKineticLaw(r); in START_TEST() local
596 Species_t *s = Model_createSpecies(m); in START_TEST() local
702 Species_t *s = Model_createSpecies(m); in START_TEST() local
1238 KineticLaw_t * kl = Reaction_createKineticLaw(r); in START_TEST() local
1555 Species_t *s = Model_createSpecies(m); in START_TEST() local
1568 KineticLaw_t *kl = Reaction_createKineticLaw(r); in START_TEST() local
1807 Species_t *s = Model_createSpecies(m); in START_TEST() local
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| H A D | TestReadFromFile9.cpp | 64 SBMLDocument* d; in START_TEST() local
69 Species* s; in START_TEST() local
71 Reaction* r; in START_TEST() local
73 KineticLaw* kl; in START_TEST() local
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| H A D | TestInternalConsistencyChecks.cpp | 210 KineticLaw *kl = r->createKineticLaw(); in START_TEST() local
268 KineticLaw *kl = new KineticLaw(2, 4); in START_TEST() local
480 Species *s = new Species(2, 4); in START_TEST() local
694 Species *s = new Species(2, 4); in START_TEST() local
754 Species *s = m->createSpecies(); in START_TEST() local
1110 KineticLaw *kl = new KineticLaw(2, 4); in START_TEST() local
1511 Species *s = new Species(2, 4); in START_TEST() local
1550 Species *s = new Species(2, 4); in START_TEST() local
1584 Species *s = new Species(2, 4); in START_TEST() local
2500 KineticLaw *kl = r->createKineticLaw(); in START_TEST() local
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| H A D | TestReadFromFile5.cpp | 63 SBMLDocument* d; in START_TEST() local
66 Species* s; in START_TEST() local
69 Reaction* r; in START_TEST() local
71 KineticLaw* kl; in START_TEST() local
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| /dports/biology/libsbml/libsbml-5.19.0/src/sbml/test/ |
| H A D | TestReadFromFile2.c | 62 SBMLDocument_t *d; in START_TEST() local
65 KineticLaw_t *kl; in START_TEST() local
67 Reaction_t *r; in START_TEST() local
68 Species_t *s; in START_TEST() local
370 KineticLaw_t *kl; in START_TEST() local
372 Reaction_t *r; in START_TEST() local
373 Species_t *s; in START_TEST() local
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| H A D | TestReadFromFile1.c | 62 SBMLDocument_t *d; in START_TEST() local
65 KineticLaw_t *kl; in START_TEST() local
67 Reaction_t *r; in START_TEST() local
68 Species_t *s; in START_TEST() local
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| H A D | TestReadFromFile3.c | 62 SBMLDocument_t *d; in START_TEST() local
65 KineticLaw_t *kl; in START_TEST() local
68 Reaction_t *r; in START_TEST() local
69 Species_t *s; in START_TEST() local
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| H A D | TestSBMLConvert.c | 85 KineticLaw_t *kl = Reaction_createKineticLaw(r); in START_TEST() local
282 Species_t *s = in START_TEST() local
555 Species_t *s = Model_createSpecies(m); in START_TEST() local
563 KineticLaw_t *kl = Reaction_createKineticLaw(r); in START_TEST() local
596 Species_t *s = Model_createSpecies(m); in START_TEST() local
702 Species_t *s = Model_createSpecies(m); in START_TEST() local
1238 KineticLaw_t * kl = Reaction_createKineticLaw(r); in START_TEST() local
1555 Species_t *s = Model_createSpecies(m); in START_TEST() local
1568 KineticLaw_t *kl = Reaction_createKineticLaw(r); in START_TEST() local
1807 Species_t *s = Model_createSpecies(m); in START_TEST() local
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| H A D | TestReadFromFile9.cpp | 64 SBMLDocument* d; in START_TEST() local
69 Species* s; in START_TEST() local
71 Reaction* r; in START_TEST() local
73 KineticLaw* kl; in START_TEST() local
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| H A D | TestInternalConsistencyChecks.cpp | 210 KineticLaw *kl = r->createKineticLaw(); in START_TEST() local
268 KineticLaw *kl = new KineticLaw(2, 4); in START_TEST() local
480 Species *s = new Species(2, 4); in START_TEST() local
694 Species *s = new Species(2, 4); in START_TEST() local
754 Species *s = m->createSpecies(); in START_TEST() local
1110 KineticLaw *kl = new KineticLaw(2, 4); in START_TEST() local
1511 Species *s = new Species(2, 4); in START_TEST() local
1550 Species *s = new Species(2, 4); in START_TEST() local
1584 Species *s = new Species(2, 4); in START_TEST() local
2500 KineticLaw *kl = r->createKineticLaw(); in START_TEST() local
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| H A D | TestReadFromFile5.cpp | 63 SBMLDocument* d; in START_TEST() local
66 Species* s; in START_TEST() local
69 Reaction* r; in START_TEST() local
71 KineticLaw* kl; in START_TEST() local
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/bindings/java/test/org/sbml/libsbml/test/sbml/ |
| H A D | TestReadFromFile2.java | 128 SBMLDocument d; in test_create_l1v1_units() local
131 KineticLaw kl; in test_create_l1v1_units() local
133 Reaction r; in test_create_l1v1_units() local
134 Species s; in test_create_l1v1_units() local
211 SBMLDocument d; in test_read_l1v1_units() local
214 KineticLaw kl; in test_read_l1v1_units() local
216 Reaction r; in test_read_l1v1_units() local
217 Species s; in test_read_l1v1_units() local
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| H A D | TestInternalConsistencyChecks.java | 246 Species s = m.createSpecies(); in test_internal_consistency_check_20623() local
566 KineticLaw kl = r.createKineticLaw(); in test_internal_consistency_check_21130() local
592 KineticLaw kl = r.createKineticLaw(); in test_internal_consistency_check_21172() local
904 KineticLaw kl = r.createKineticLaw(); in test_internal_consistency_check_99903_localparam() local
954 KineticLaw kl = new KineticLaw(2,4); in test_internal_consistency_check_99904_kl() local
1080 Species s = new Species(2,4); in test_internal_consistency_check_99904_species() local
1205 Species s = new Species(2,4); in test_internal_consistency_check_99905_species() local
1444 KineticLaw kl = new KineticLaw(2,4); in test_internal_consistency_check_99911_kl() local
1673 Species s = new Species(2,4); in test_internal_consistency_check_99916_reaction() local
1695 Species s = new Species(2,4); in test_internal_consistency_check_99916_rule() local
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| H A D | TestSBMLParentObject.java | 253 Delay d = new Delay(2,4); in test_Delay_parent_add() local
431 KineticLaw kl = new KineticLaw(2,4); in test_KineticLaw_Parameter_parent_add() local
446 KineticLaw kl = new KineticLaw(2,4); in test_KineticLaw_Parameter_parent_create() local
460 KineticLaw kl = m.createKineticLaw(); in test_KineticLaw_Parameter_parent_create_model() local
474 KineticLaw kl = r.createKineticLaw(); in test_KineticLaw_parent_NULL() local
488 KineticLaw kl = new KineticLaw(2,4); in test_KineticLaw_parent_add() local
499 KineticLaw kl = r.createKineticLaw(); in test_KineticLaw_parent_create() local
508 KineticLaw kl = r.createKineticLaw(); in test_KineticLaw_parent_create_model() local
582 KineticLaw kl = c.createKineticLaw(); in test_Reaction_parent_NULL() local
800 Species s = m.createSpecies(); in test_Species_parent_create() local
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| H A D | TestSBMLConvert.java | 130 Reaction r = m.createReaction(); in test_SBMLConvert_addModifiersToReaction() local
131 KineticLaw kl = r.createKineticLaw(); in test_SBMLConvert_addModifiersToReaction() local
278 Species s = new Species(2,4); in test_SBMLConvert_convertToL1_Species_Amount() local
295 Species s = new Species(2,1); in test_SBMLConvert_convertToL1_Species_Concentration() local
428 Species s = m.createSpecies(); in test_SBMLConvert_convertToL3_localParameters() local
431 Reaction r = m.createReaction(); in test_SBMLConvert_convertToL3_localParameters() local
434 KineticLaw kl = r.createKineticLaw(); in test_SBMLConvert_convertToL3_localParameters() local
466 Reaction r = m.createReaction(); in test_SBMLConvert_convertToL3_product() local
480 Reaction r = m.createReaction(); in test_SBMLConvert_convertToL3_reactant() local
508 Species s = m.createSpecies(); in test_SBMLConvert_convertToL3_species() local
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| H A D | TestRequiredAttributes.java | 144 AssignmentRule r = new AssignmentRule(2,4); in test_AssignmentRule() local
153 AssignmentRule r = new AssignmentRule(1,2); in test_AssignmentRule_L1() local
189 Delay d = new Delay(2,4); in test_Delay() local
230 KineticLaw kl = new KineticLaw(2,4); in test_KineticLaw() local
237 KineticLaw kl = new KineticLaw(1,2); in test_KineticLaw_L1() local
282 RateRule r = new RateRule(2,4); in test_RateRule() local
291 RateRule r = new RateRule(1,2); in test_RateRule_L1() local
302 Reaction r = new Reaction(2,4); in test_Reaction() local
311 Species s = new Species(2,4); in test_Species() local
340 Species s = new Species(1,2); in test_Species_L1() local
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| /dports/biology/libsbml/libsbml-5.19.0/src/bindings/java/test/org/sbml/libsbml/test/sbml/ |
| H A D | TestReadFromFile2.java | 128 SBMLDocument d; in test_create_l1v1_units() local
131 KineticLaw kl; in test_create_l1v1_units() local
133 Reaction r; in test_create_l1v1_units() local
134 Species s; in test_create_l1v1_units() local
211 SBMLDocument d; in test_read_l1v1_units() local
214 KineticLaw kl; in test_read_l1v1_units() local
216 Reaction r; in test_read_l1v1_units() local
217 Species s; in test_read_l1v1_units() local
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| H A D | TestInternalConsistencyChecks.java | 246 Species s = m.createSpecies(); in test_internal_consistency_check_20623() local
566 KineticLaw kl = r.createKineticLaw(); in test_internal_consistency_check_21130() local
592 KineticLaw kl = r.createKineticLaw(); in test_internal_consistency_check_21172() local
904 KineticLaw kl = r.createKineticLaw(); in test_internal_consistency_check_99903_localparam() local
954 KineticLaw kl = new KineticLaw(2,4); in test_internal_consistency_check_99904_kl() local
1080 Species s = new Species(2,4); in test_internal_consistency_check_99904_species() local
1205 Species s = new Species(2,4); in test_internal_consistency_check_99905_species() local
1444 KineticLaw kl = new KineticLaw(2,4); in test_internal_consistency_check_99911_kl() local
1673 Species s = new Species(2,4); in test_internal_consistency_check_99916_reaction() local
1695 Species s = new Species(2,4); in test_internal_consistency_check_99916_rule() local
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| H A D | TestSBMLParentObject.java | 253 Delay d = new Delay(2,4); in test_Delay_parent_add() local
431 KineticLaw kl = new KineticLaw(2,4); in test_KineticLaw_Parameter_parent_add() local
446 KineticLaw kl = new KineticLaw(2,4); in test_KineticLaw_Parameter_parent_create() local
460 KineticLaw kl = m.createKineticLaw(); in test_KineticLaw_Parameter_parent_create_model() local
474 KineticLaw kl = r.createKineticLaw(); in test_KineticLaw_parent_NULL() local
488 KineticLaw kl = new KineticLaw(2,4); in test_KineticLaw_parent_add() local
499 KineticLaw kl = r.createKineticLaw(); in test_KineticLaw_parent_create() local
508 KineticLaw kl = r.createKineticLaw(); in test_KineticLaw_parent_create_model() local
582 KineticLaw kl = c.createKineticLaw(); in test_Reaction_parent_NULL() local
800 Species s = m.createSpecies(); in test_Species_parent_create() local
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| H A D | TestSBMLConvert.java | 130 Reaction r = m.createReaction(); in test_SBMLConvert_addModifiersToReaction() local
131 KineticLaw kl = r.createKineticLaw(); in test_SBMLConvert_addModifiersToReaction() local
278 Species s = new Species(2,4); in test_SBMLConvert_convertToL1_Species_Amount() local
295 Species s = new Species(2,1); in test_SBMLConvert_convertToL1_Species_Concentration() local
428 Species s = m.createSpecies(); in test_SBMLConvert_convertToL3_localParameters() local
431 Reaction r = m.createReaction(); in test_SBMLConvert_convertToL3_localParameters() local
434 KineticLaw kl = r.createKineticLaw(); in test_SBMLConvert_convertToL3_localParameters() local
466 Reaction r = m.createReaction(); in test_SBMLConvert_convertToL3_product() local
480 Reaction r = m.createReaction(); in test_SBMLConvert_convertToL3_reactant() local
508 Species s = m.createSpecies(); in test_SBMLConvert_convertToL3_species() local
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| H A D | TestRequiredAttributes.java | 144 AssignmentRule r = new AssignmentRule(2,4); in test_AssignmentRule() local
153 AssignmentRule r = new AssignmentRule(1,2); in test_AssignmentRule_L1() local
189 Delay d = new Delay(2,4); in test_Delay() local
230 KineticLaw kl = new KineticLaw(2,4); in test_KineticLaw() local
237 KineticLaw kl = new KineticLaw(1,2); in test_KineticLaw_L1() local
282 RateRule r = new RateRule(2,4); in test_RateRule() local
291 RateRule r = new RateRule(1,2); in test_RateRule_L1() local
302 Reaction r = new Reaction(2,4); in test_Reaction() local
311 Species s = new Species(2,4); in test_Species() local
340 Species s = new Species(1,2); in test_Species_L1() local
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| /dports/math/coxeter3/coxeter-7b5a1f0/ |
| H A D | kl.cpp | 13 namespace kl { namespace
1834 Degree d = (ly-lx-1)/2; in readMuRow() local
1863 Length d = mu.height; in readMuRow() local
1907 KLCoeff r = mu(xs,ys); in recursiveMu() local
1943 Degree d = (l-1)/2 - 1; in recursiveMu() local
2113 Degree d = pol[j].deg(); in writeKLRow() local
2540 KLCoeff r = kl.mu(x,y); in showMu() local
2607 const CoxNbr& y, const KLCoeff& r, const Interface& I) in showRecursiveMu()
2694 Degree d = (l-1)/2 - 1; in showRecursiveMu() local
2785 const CoxNbr& y, const KLCoeff& r, const Interface& I) in showSimpleMu()
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