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Searched defs:FastaReader (Results 1 – 8 of 8) sorted by relevance

/dports/biology/fastp/fastp-0.23.2/src/
H A Dfastareader.cpp6 FastaReader::FastaReader(string faFile, bool forceUpperCase) in FastaReader() function in FastaReader
/dports/science/py-DendroPy/DendroPy-4.4.0/src/dendropy/dataio/
H A Dfastareader.py28 class FastaReader(ioservice.DataReader): class
/dports/biology/py-bx-python/bx-python-0.8.13/lib/bx/seq/
H A Dfasta.py81 class FastaReader(SeqReader): class
/dports/biology/pbbam/pbbam-0.18.0/src/
H A DFastaReader.cpp89 FastaReader::FastaReader(const std::string& fn) in FastaReader() function in PacBio::BAM::FastaReader
/dports/biology/py-dnaio/dnaio-0.5.1/src/dnaio/
H A Dreaders.py54 class FastaReader(BinaryFileReader): class
/dports/biology/abyss/abyss-2.3.1/DataLayer/
H A DFastaReader.cpp47 FastaReader::FastaReader(const char* path, int flags, int len) in FastaReader() function in FastaReader
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/align/ngalign/
H A Dsequence_set.cpp694 CFastaReader FastaReader(*m_FastaStream); in CreateQueryFactory() local
733 CFastaReader FastaReader(*m_FastaStream); in CreateQueryFactory() local
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/align/ngalign/app/
H A Dngalign_app.cpp788 CFastaReader FastaReader(In); in x_LoadExternalSequences() local