| /dports/biology/ncbi-toolkit/ncbi/ddv/ |
| H A D | ddvcreate.h | 170 Boolean IsGap; member
181 Boolean IsGap; member
190 Boolean IsGap; member
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| H A D | ddvcreate.c | 844 Boolean more,bFirstMtdp,bFirstPgp,IsGap; in DDV_PopulateDisplayForDisc() local
1139 static void UABitDescrInit(UABitDescrPtr ubd,Int4 Start,Int4 Stop,Boolean IsGap) in UABitDescrInit()
1270 BoolPtr IsGap) in UAMgrUAMsgGetInfo()
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| /dports/biology/ugene/ugene-40.1/src/libs_3rdparty/qscore/src/qscore/ |
| H A D | qscore.h | 80 static inline bool IsGap(char c) in IsGap() function
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| H A D | qscore_msa_qscore.cpp | 199 bool MSA_QScore::IsGap(unsigned uSeqIndex, unsigned uColIndex) const in IsGap() function in MSA_QScore
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| /dports/biology/iqtree/IQ-TREE-2.0.6/ncl/ |
| H A D | nxsdiscretematrix.cpp | 386 bool NxsDiscreteMatrix::IsGap( in IsGap() function in NxsDiscreteMatrix
403 bool NxsDiscreteMatrix::IsGap( in IsGap() function in NxsDiscreteMatrix
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objtools/cddalignview/ |
| H A D | cav_alndisplay.hpp | 144 inline bool IsGap(char ch) { return (ch == '-'); } in IsGap() function
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objtools/alnmgr/ |
| H A D | aln_explorer.hpp | 133 inline bool IsGap(void) const { in IsGap() function in IAlnSegment
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| H A D | alnmap.hpp | 304 bool IsGap(void) const { return m_SeqRange.GetFrom() < 0; } in IsGap() function in CAlnMap::CAlnChunk
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objtools/alnmgr/ |
| H A D | aln_explorer.hpp | 133 inline bool IsGap(void) const { in IsGap() function in IAlnSegment
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| H A D | alnmap.hpp | 304 bool IsGap(void) const { return m_SeqRange.GetFrom() < 0; } in IsGap() function in CAlnMap::CAlnChunk
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objtools/readers/ |
| H A D | agp_util.hpp | 218 static bool IsGap(char c) in IsGap() function in CAgpRow
235 bool IsGap() const in IsGap() function in CAgpRow
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objtools/readers/ |
| H A D | agp_util.hpp | 218 static bool IsGap(char c) in IsGap() function in CAgpRow
235 bool IsGap() const in IsGap() function in CAgpRow
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| /dports/biology/ncbi-toolkit/ncbi/api/ |
| H A D | udvseq.h | 181 Boolean IsGap; /*display a gap */ member
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| H A D | samutil.c | 3225 Boolean IsGap, Boolean IsUnAligned, Boolean Before) { in DDE_AddMsaTxtNode()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/align/ngalign/ |
| H A D | unordered_spliter.cpp | 232 bool IsGap; in x_SplitDeltaExt() local
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| /dports/biology/muscle/muscle-3.8.1551/ |
| H A D | msa.cpp | 192 bool MSA::IsGap(unsigned uSeqIndex, unsigned uIndex) const in IsGap() function in MSA
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| /dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/umuscle/src/muscle/ |
| H A D | msa.cpp | 224 bool MSA::IsGap(unsigned uSeqIndex, unsigned uIndex) const in IsGap() function in MSA
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/validator/ |
| H A D | single_feat_validator.cpp | 846 bool CGapCache::IsGap(size_t pos) in IsGap() function in CGapCache
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