| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/tests/modifier_cyclic_shape/ |
| H A D | test_modifier_cyclic_shape.h | 55 typedef typename Iterator<TModStr, Standard>::Type TIter; in test_iterator() typedef
|
| /dports/biology/seqan/seqan-library-2.4.0/include/seqan/bam_io/ |
| H A D | bam_scanner_cache.h | 115 typedef typename Iterator<TSequence const, Standard>::Type TIter; in _suffixHash() typedef
|
| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/bam_io/ |
| H A D | bam_scanner_cache.h | 115 typedef typename Iterator<TSequence const, Standard>::Type TIter; in _suffixHash() typedef
|
| /dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/bam_io/ |
| H A D | bam_scanner_cache.h | 124 typedef typename Iterator<TSequence const, Standard>::Type TIter; in _suffixHash() typedef
|
| /dports/biology/seqan1/seqan-1.3.1/apps/splazers/ |
| H A D | outputFormat.h | 192 typedef typename Iterator<TRow>::Type TIter; in getErrorDistribution() typedef
267 typedef typename Iterator<typename Row<TAlign>::Type const>::Type TIter; in dumpAlignment() typedef
594 typedef typename Iterator<typename Row<TAlign>::Type const>::Type TIter; in dumpAlignment() typedef
|
| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/tests/journaled_set/ |
| H A D | test_journaled_set.h | 368 typedef Iterator<StringSet<TJString, Owner<JournaledSet> > >::Type TIter; in SEQAN_DEFINE_TEST() typedef
|
| /dports/misc/vxl/vxl-3.3.2/contrib/rpl/rgrl/ |
| H A D | rgrl_match_set.cxx | 282 typedef FIter::to_iterator TIter; in set_num_constraints_per_match() typedef
305 typedef FIter::to_iterator TIter; in write() typedef
|
| H A D | rgrl_est_proj_rad_func.hxx | 357 typedef FIter::to_iterator TIter; in f() typedef
404 typedef FIter::to_iterator TIter; in gradf() typedef
|
| H A D | rgrl_est_quadratic.cxx | 43 typedef FIter::to_iterator TIter; in estimate() typedef
|
| /dports/biology/seqan1/seqan-1.3.1/apps/rep_sep/ |
| H A D | utils.h | 171 typedef typename Iterator< String<char> >::Type TIter; in _parseIds() typedef
|
| /dports/biology/seqan1/seqan-1.3.1/seqan/index/ |
| H A D | shape_onegapped.h | 313 typedef typename Iterator<TShapeString const>::Type TIter; in stringToShape() typedef
|
| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/rep_sep/ |
| H A D | utils.h | 173 typedef typename Iterator< String<char> >::Type TIter; in _parseIds() typedef
|
| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/index/ |
| H A D | shape_onegapped.h | 337 typedef typename Iterator<TShapeString const>::Type TIter; in stringToShape() typedef
|
| /dports/biology/seqan1/seqan-1.3.1/seqan/file/ |
| H A D | file_format_fasta_align.h | 281 typedef typename Iterator<typename Row<TAlign>::Type const, Standard>::Type TIter; in _writeImpl() typedef
|
| /dports/biology/seqan/seqan-library-2.4.0/include/seqan/index/ |
| H A D | shape_onegapped.h | 337 typedef typename Iterator<TShapeString const>::Type TIter; in stringToShape() typedef
|
| /dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/index/ |
| H A D | shape_onegapped.h | 341 typedef typename Iterator<TShapeString const>::Type TIter; in stringToShape() typedef
|
| /dports/biology/seqan1/seqan-1.3.1/seqan/graph_types/ |
| H A D | graph_impl_tree.h | 197 typedef typename Iterator<String<TEdgeStump*>, Standard>::Type TIter; in _copyGraph() typedef
319 typedef typename Iterator<String<TEdgeStump*>, Standard>::Type TIter; in clearEdges() typedef
587 typedef typename Iterator<String<TEdgeStump*>, Standard>::Type TIter; in removeInEdges() typedef
|
| /dports/biology/seqan/seqan-library-2.4.0/include/seqan/graph_types/ |
| H A D | graph_impl_tree.h | 188 typedef typename Iterator<String<TEdgeStump*>, Standard>::Type TIter; in _copyGraph() typedef
304 typedef typename Iterator<String<TEdgeStump*>, Standard>::Type TIter; in clearEdges() typedef
558 typedef typename Iterator<String<TEdgeStump*>, Standard>::Type TIter; in removeInEdges() typedef
|
| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/graph_types/ |
| H A D | graph_impl_tree.h | 188 typedef typename Iterator<String<TEdgeStump*>, Standard>::Type TIter; in _copyGraph() typedef
304 typedef typename Iterator<String<TEdgeStump*>, Standard>::Type TIter; in clearEdges() typedef
558 typedef typename Iterator<String<TEdgeStump*>, Standard>::Type TIter; in removeInEdges() typedef
|
| /dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/graph_types/ |
| H A D | graph_impl_tree.h | 195 typedef typename Iterator<String<TEdgeStump*>, Standard>::Type TIter; in _copyGraph() typedef
317 typedef typename Iterator<String<TEdgeStump*>, Standard>::Type TIter; in clearEdges() typedef
583 typedef typename Iterator<String<TEdgeStump*>, Standard>::Type TIter; in removeInEdges() typedef
|
| H A D | graph_impl_undirected.h | 155 typedef typename Iterator<String<TEdgeStump*>, Standard>::Type TIter; in _copyGraph() typedef
265 typedef typename Iterator<String<TEdgeStump*>, Standard>::Type TIter; in clearEdges() typedef
|
| /dports/biology/seqan1/seqan-1.3.1/apps/razers/ |
| H A D | outputFormat.h | 192 typedef typename Iterator<TRow>::Type TIter; in getErrorDistribution() typedef
267 typedef typename Iterator<typename Row<TAlign>::Type const>::Type TIter; in dumpAlignment() typedef
|
| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/razers/ |
| H A D | outputFormat.h | 196 typedef typename Iterator<TRow>::Type TIter; in getErrorDistribution() typedef
271 typedef typename Iterator<typename Row<TAlign>::Type const>::Type TIter; in dumpAlignment() typedef
|
| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/yara/ |
| H A D | mapper_writer.h | 297 typedef typename Iterator<TMatches const, Standard>::Type TIter; in _writeMappedRead() typedef
340 typedef typename Iterator<TMatches const, Standard>::Type TIter; in _writeMappedRead() typedef
|
| /dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/parallel/ |
| H A D | parallel_algorithms.h | 221 typedef typename Iterator<TContainer, TIterSpec>::Type TIter; in iterate() typedef
236 typedef typename Iterator<TContainer, TIterSpec>::Type TIter; in iterate() typedef
|