Home
last modified time | relevance | path

Searched defs:TString (Results 1 – 25 of 475) sorted by relevance

12345678910>>...19

/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/sequence/
H A Dstring_set_owner.h102 StringSet(String<TString, TOtherSpec> const &other) : in StringSet()
164 StringSet<TString, Owner<Default> > & me, in appendValue()
183 StringSet<TString, Owner<TSpec> > & me, in assignValue()
223 value(StringSet<TString, Owner<Default> > & me, TPos pos) in value()
241 erase(StringSet<TString, Owner<Default> > & me, TPos pos) in erase()
263 getValueById(StringSet<TString, Owner<TSpec> >& me, in getValueById()
288 assignValueById(StringSet<TString, Owner<TSpec> > & me, in assignValueById()
323 positionToId(StringSet<TString, Owner<TSpec> > &, in positionToId()
336 positionToId(StringSet<TString, Owner<TSpec> > const &, in positionToId()
349 idToPosition(StringSet<TString, Owner<TSpec> > const&, in idToPosition()
[all …]
H A Dstring_set_dependent_generous.h91 StringSet(StringSet<TString, Owner<TDefault> > const& _other) : in StringSet() function
132 StringSet<TString, Dependent<Generous> > & me, in appendValue()
146 inline void clear(StringSet<TString, Dependent<Generous> > & me) in clear()
160 length(StringSet<TString, Dependent<Generous> > & me) in length()
171 value(StringSet<TString, Dependent<Generous> >& me, TPos pos) in value()
183 value(StringSet<TString, Dependent<Generous> > const & me, TPos pos) in value()
199 getValueById(StringSet<TString, Dependent<Generous> >& me, in getValueById()
215 assignValueById(StringSet<TString, Dependent<Generous> >& me, in assignValueById()
255 positionToId(StringSet<TString, Dependent<Generous> >& me, in positionToId()
264 positionToId(StringSet<TString, Dependent<Generous> > const& me, in positionToId()
[all …]
H A Dstring_set_dependent_tight.h118 StringSet(StringSet<TString, Owner<TDefault> > const & _other) : in StringSet() function
161 StringSet<TString, Dependent<Tight> > & me, in appendValue()
180 inline void clear(StringSet<TString, Dependent<Tight> >& me) in clear()
198 value(StringSet<TString, Dependent<Tight> >& me, TPos pos) in value()
206 value(StringSet<TString, Dependent<Tight> >const & me, TPos pos) in value()
217 getValueById(StringSet<TString, Dependent<Tight> > & me, in getValueById()
230 assignValueById(StringSet<TString, Dependent<Tight> >& me, in assignValueById()
242 assignValueById(StringSet<TString, Dependent<Tight> >& me, in assignValueById()
301 positionToId(StringSet<TString, Dependent<Tight> > & me, in positionToId()
310 positionToId(StringSet<TString, Dependent<Tight> > const & me, in positionToId()
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/sequence/
H A Dstring_set_owner.h102 StringSet(String<TString, TOtherSpec> const & other) : in StringSet()
164 StringSet<TString, Owner<Default> > & me, in appendValue()
183 StringSet<TString, Owner<TSpec> > & me, in assignValue()
210 StringSet<TString, Owner<TSpec> > & me, in insertValue()
226 StringSet<TString, Owner<> > & target, in replace()
333 getValueById(StringSet<TString, Owner<TSpec> >& me, in getValueById()
358 assignValueById(StringSet<TString, Owner<TSpec> > & me, in assignValueById()
393 positionToId(StringSet<TString, Owner<TSpec> > &, in positionToId()
406 positionToId(StringSet<TString, Owner<TSpec> > const &, in positionToId()
419 idToPosition(StringSet<TString, Owner<TSpec> > const&, in idToPosition()
[all …]
H A Dstring_set_dependent_generous.h154 StringSet<TString, Dependent<Generous> > & me, in appendValue()
168 StringSet<TString, Dependent<Generous> > & me, in insertValue()
194 inline void clear(StringSet<TString, Dependent<Generous> > & me) in clear()
207 length(StringSet<TString, Dependent<Generous> > & me) in length()
214 length(StringSet<TString, Dependent<Generous> > const & me) in length()
225 value(StringSet<TString, Dependent<Generous> >& me, TPos pos) in value()
251 getValueById(StringSet<TString, Dependent<Generous> >& me, in getValueById()
266 assignValueById(StringSet<TString, Dependent<Generous> >& me, in assignValueById()
304 positionToId(StringSet<TString, Dependent<Generous> >& me, in positionToId()
312 positionToId(StringSet<TString, Dependent<Generous> > const& me, in positionToId()
[all …]
H A Dstring_set_dependent_tight.h168 StringSet(StringSet<TString, Owner<TDefault> > const & _other) : in StringSet() function
210 StringSet<TString, Dependent<Tight> > & me, in appendValue()
228 inline void clear(StringSet<TString, Dependent<Tight> >& me) in clear()
245 value(StringSet<TString, Dependent<Tight> >& me, TPos pos) in value()
252 value(StringSet<TString, Dependent<Tight> >const & me, TPos pos) in value()
263 getValueById(StringSet<TString, Dependent<Tight> > & me, in getValueById()
276 assignValueById(StringSet<TString, Dependent<Tight> >& me, in assignValueById()
287 assignValueById(StringSet<TString, Dependent<Tight> >& me, in assignValueById()
344 positionToId(StringSet<TString, Dependent<Tight> > & me, in positionToId()
352 positionToId(StringSet<TString, Dependent<Tight> > const & me, in positionToId()
[all …]
/dports/biology/seqan/seqan-library-2.4.0/include/seqan/sequence/
H A Dstring_set_owner.h102 StringSet(String<TString, TOtherSpec> const & other) : in StringSet()
164 StringSet<TString, Owner<Default> > & me, in appendValue()
183 StringSet<TString, Owner<TSpec> > & me, in assignValue()
210 StringSet<TString, Owner<TSpec> > & me, in insertValue()
226 StringSet<TString, Owner<> > & target, in replace()
333 getValueById(StringSet<TString, Owner<TSpec> >& me, in getValueById()
358 assignValueById(StringSet<TString, Owner<TSpec> > & me, in assignValueById()
393 positionToId(StringSet<TString, Owner<TSpec> > &, in positionToId()
406 positionToId(StringSet<TString, Owner<TSpec> > const &, in positionToId()
419 idToPosition(StringSet<TString, Owner<TSpec> > const&, in idToPosition()
[all …]
H A Dstring_set_dependent_generous.h154 StringSet<TString, Dependent<Generous> > & me, in appendValue()
168 StringSet<TString, Dependent<Generous> > & me, in insertValue()
194 inline void clear(StringSet<TString, Dependent<Generous> > & me) in clear()
207 length(StringSet<TString, Dependent<Generous> > & me) in length()
214 length(StringSet<TString, Dependent<Generous> > const & me) in length()
225 value(StringSet<TString, Dependent<Generous> >& me, TPos pos) in value()
251 getValueById(StringSet<TString, Dependent<Generous> >& me, in getValueById()
266 assignValueById(StringSet<TString, Dependent<Generous> >& me, in assignValueById()
304 positionToId(StringSet<TString, Dependent<Generous> >& me, in positionToId()
312 positionToId(StringSet<TString, Dependent<Generous> > const& me, in positionToId()
[all …]
H A Dstring_set_dependent_tight.h168 StringSet(StringSet<TString, Owner<TDefault> > const & _other) : in StringSet() function
210 StringSet<TString, Dependent<Tight> > & me, in appendValue()
228 inline void clear(StringSet<TString, Dependent<Tight> >& me) in clear()
245 value(StringSet<TString, Dependent<Tight> >& me, TPos pos) in value()
252 value(StringSet<TString, Dependent<Tight> >const & me, TPos pos) in value()
263 getValueById(StringSet<TString, Dependent<Tight> > & me, in getValueById()
276 assignValueById(StringSet<TString, Dependent<Tight> >& me, in assignValueById()
287 assignValueById(StringSet<TString, Dependent<Tight> >& me, in assignValueById()
344 positionToId(StringSet<TString, Dependent<Tight> > & me, in positionToId()
352 positionToId(StringSet<TString, Dependent<Tight> > const & me, in positionToId()
[all …]
/dports/biology/seqan1/seqan-1.3.1/seqan/sequence/
H A Dstring_set_dependent_generous.h77 StringSet(StringSet<TString, Owner<TDefault> > const& _other) in StringSet() function
119 StringSet<TString, Dependent<Generous> > & me, in appendValue()
133 inline void clear(StringSet<TString, Dependent<Generous> > & me) in clear()
147 value(StringSet<TString, Dependent<Generous> >& me, TPos pos) in value()
159 value(StringSet<TString, Dependent<Generous> > const & me, TPos pos) in value()
175 getValueById(StringSet<TString, Dependent<Generous> >& me, in getValueById()
191 assignValueById(StringSet<TString, Dependent<Generous> >& me, in assignValueById()
212 removeValueById(StringSet<TString, Dependent<Generous> >& me, TId const id) in removeValueById()
231 positionToId(StringSet<TString, Dependent<Generous> >& me, in positionToId()
240 positionToId(StringSet<TString, Dependent<Generous> > const& me, in positionToId()
[all …]
H A Dstring_set_owner.h126 StringSet<TString, Owner<Default> > & me, in appendValue()
141 StringSet<TString, Owner<TSpec> > & me, in assignValue()
166 inline void clear(StringSet<TString, Owner<Default> > & me) in clear()
180 value(StringSet<TString, Owner<Default> > & me, TPos pos) in value()
187 value(StringSet<TString, Owner<Default> > const & me, TPos pos) in value()
198 getValueById(StringSet<TString, Owner<TSpec> >& me, in getValueById()
213 assignValueById(StringSet<TString, Owner<TSpec> > & me, in assignValueById()
234 removeValueById(StringSet<TString, Owner<TSpec> > & me, TId const id) in removeValueById()
248 positionToId(StringSet<TString, Owner<TSpec> > &, in positionToId()
261 positionToId(StringSet<TString, Owner<TSpec> > const &, in positionToId()
[all …]
H A Dstring_set_dependent_tight.h101 StringSet(StringSet<TString, Owner<TDefault> > const & _other) in StringSet() function
144 StringSet<TString, Dependent<Tight> > & me, in appendValue()
163 inline void clear(StringSet<TString, Dependent<Tight> >& me) in clear()
181 value(StringSet<TString, Dependent<Tight> >& me, TPos pos) in value()
189 value(StringSet<TString, Dependent<Tight> >const & me, TPos pos) in value()
200 getValueById(StringSet<TString, Dependent<Tight> > & me, in getValueById()
213 assignValueById(StringSet<TString, Dependent<Tight> >& me, in assignValueById()
225 assignValueById(StringSet<TString, Dependent<Tight> >& me, in assignValueById()
285 positionToId(StringSet<TString, Dependent<Tight> > & me, in positionToId()
294 positionToId(StringSet<TString, Dependent<Tight> > const & me, in positionToId()
[all …]
/dports/devel/liteide/liteide-x37.4/liteidex/src/libgopher/
H A Dlibgopher.go67 func Setenv(ck *C.TString, cv *C.TString) {
72 func SetBuildEnv(ck *C.TString, cv *C.TString) {
91 func InvokeAsync(cid *C.TString, cargs *C.TString, csep *C.TString, csin *C.TString, ctx unsafe.Poi…
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/tests/sequence/
H A Dtest_segment_beta.h552 void testSegmentLess(TString & /*Tag*/) in testSegmentLess() argument
792 void testSegmentEqual(TString & /*Tag*/) in testSegmentEqual() argument
1130 void testSegmentBegin(TString & /*Tag*/) in testSegmentBegin() argument
1223 void testSegmentClear(TString & /*Tag*/) in testSegmentClear() argument
1253 void testSegmentEnd(TString & /*Tag*/) in testSegmentEnd() argument
1348 void testSegmentFront(TString & /*Tag*/) in testSegmentFront() argument
1460 void testSegmentIter(TString & /*Tag*/) in testSegmentIter() argument
1530 void testSegmentLength(TString & /*Tag*/) in testSegmentLength() argument
1676 void testSegmentResize(TString & /*Tag*/) in testSegmentResize() argument
1715 void testSegmentSwap(TString & /*Tag*/) in testSegmentSwap() argument
[all …]
H A Dtest_sequence.h161 typedef TAlphabetSpecPair_ TString; typedef
294 void testSequenceLess(TString & /*Tag*/) in testSequenceLess() argument
565 void testSequenceEqual(TString & /*Tag*/) in testSequenceEqual() argument
802 void testSequenceSwap(TString & /*Tag*/) in testSequenceSwap() argument
1054 void testSequenceBack(TString & /*Tag*/) in testSequenceBack() argument
1094 void testSequenceBegin(TString & /*Tag*/) in testSequenceBegin() argument
1184 void testSequenceClear(TString & /*Tag*/) in testSequenceClear() argument
1215 void testSequenceEnd(TString & /*Tag*/) in testSequenceEnd() argument
1288 void testSequenceErase(TString & /*Tag*/) in testSequenceErase() argument
1363 void testSequenceFront(TString & /*Tag*/) in testSequenceFront() argument
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/journaled_set/
H A Djournaled_set_join.h75 join(StringSet<TString, Owner<JournaledSet> > & journalSet, in join()
93 join(StringSet<TString, Owner<JournaledSet> > & journalSet, in join()
113 join(StringSet<TString, Owner<JournaledSet> > & journalSet, in join()
122 join(StringSet<TString, Owner<JournaledSet> > & journalSet, in join()
/dports/biology/seqan/seqan-library-2.4.0/include/seqan/journaled_set/
H A Djournaled_set_join.h75 join(StringSet<TString, Owner<JournaledSet> > & journalSet, in join()
93 join(StringSet<TString, Owner<JournaledSet> > & journalSet, in join()
113 join(StringSet<TString, Owner<JournaledSet> > & journalSet, in join()
122 join(StringSet<TString, Owner<JournaledSet> > & journalSet, in join()
/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/journaled_set/
H A Djournaled_set_join.h75 join(StringSet<TString, Owner<JournaledSet> > & journalSet, in join()
93 join(StringSet<TString, Owner<JournaledSet> > & journalSet, in join()
113 join(StringSet<TString, Owner<JournaledSet> > & journalSet, in join()
122 join(StringSet<TString, Owner<JournaledSet> > & journalSet, in join()
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/tests/modifier/
H A Dtest_modifier_string.h48 typedef seqan::Dna5String TString; in SEQAN_DEFINE_TEST() typedef
128 typedef seqan::Dna5String TString; in SEQAN_DEFINE_TEST() typedef
224 typedef Dna5String TString; in SEQAN_DEFINE_TEST() typedef
275 typedef seqan::CharString TString; in SEQAN_DEFINE_TEST() typedef
307 typedef seqan::CharString TString; in SEQAN_DEFINE_TEST() typedef
343 typedef seqan::CharString TString; in SEQAN_DEFINE_TEST() typedef
436 typedef seqan::CharString TString; in SEQAN_DEFINE_TEST() typedef
451 typedef seqan::CharString TString; in SEQAN_DEFINE_TEST() typedef
468 typedef seqan::CharString TString; in SEQAN_DEFINE_TEST() typedef
484 typedef CharString TString; in SEQAN_DEFINE_TEST() typedef
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/tests/align/
H A Dtest_align_gaps.h57 typedef Dna5String TString; in testAlignGapsMetafunctions() typedef
92 typedef Dna5String TString; in testAlignGapsConstructorAndSource() typedef
124 typedef Dna5String TString; in testAlignGapsSetSource() typedef
160 typedef Dna5String TString; in testAlignGapsAssignSource() typedef
187 typedef Dna5String TString; in testAlignGapsGapOperationsGapCenter() typedef
389 typedef Dna5String TString; in testAlignGapsGapOperationsGapsLeading() typedef
573 typedef Dna5String TString; in testAlignGapsGapOperationsGapsTrailing() typedef
792 typedef Dna5String TString; in testAlignGapsSequenceInterfaceGapsTrailing() typedef
896 typedef Dna5String TString; in testAlignGapsSourceViewPositionUngapped() typedef
927 typedef Dna5String TString; in testAlignGapsSourceViewPositionGapsCenter() typedef
[all …]
H A Dtest_align_gaps_iterator.h51 typedef Dna5String TString; in testAlignGapsIteratorMetafunctions() typedef
74 typedef Dna5String TString; in testAlignGapsIteratorTrivialIteratorFunctions() typedef
93 typedef Dna5String TString; in testAlignGapsIteratorRootedRandomAccessIteratorFunctions() typedef
156 typedef Dna5String TString; in testAlignGapsIteratorMovement() typedef
291 typedef Dna5String TString; in testAlignGapsIteratorRelations() typedef
328 typedef Dna5String TString; in testAlignGapsIteratorPointerArithmetic() typedef
355 typedef Dna5String TString; in testAlignGapsIteratorForwardIteration() typedef
385 typedef Dna5String TString; in testAlignGapsIteratorReverseIteration() typedef
417 typedef Dna5String TString; in testAlignGapsIteratorCountGapsCountCharactersIsGap() typedef
516 typedef Dna5String TString; in testAlignGapsIteratorClippedCountGapsCountCharactersIsGap() typedef
[all …]
/dports/sysutils/zoxide/zoxide-0.6.0/cargo-crates/os_str_bytes-2.4.0/src/
H A Draw.rs49 pub fn ends_with<TString>(string: &TString, suffix: &[u8]) -> bool in ends_with()
85 pub fn starts_with<TString>(string: &TString, prefix: &[u8]) -> bool in starts_with()
/dports/databases/ods2sql/ods2sql-aca63183274038487cecb6be17d7f65e92178b8c/cargo-crates/os_str_bytes-2.3.2/src/
H A Draw.rs49 pub fn ends_with<TString>(string: &TString, suffix: &[u8]) -> bool in ends_with()
85 pub fn starts_with<TString>(string: &TString, prefix: &[u8]) -> bool in starts_with()
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/tests/index/
H A Dtest_index_creation.h54 typedef String<AminoAcid> TString; in SEQAN_DEFINE_TEST() typedef
67 typedef String<AminoAcid> TString; in SEQAN_DEFINE_TEST() typedef
80 typedef String<AminoAcid> TString; in SEQAN_DEFINE_TEST() typedef
93 typedef String<AminoAcid> TString; in SEQAN_DEFINE_TEST() typedef
/dports/biology/seqan1/seqan-1.3.1/seqan/graph_msa/
H A Dgraph_align_tcoffee_library.h109 selectPairs(StringSet<TString, TSpec> const& str, in selectPairs()
150 typedef typename Value<TStringSet>::Type TString; in getAlignmentStatistics() typedef
204 appendSegmentMatches(StringSet<TString, Dependent<TSpec> > const& str, in appendSegmentMatches()
252 appendSegmentMatches(StringSet<TString, Dependent<TSpec> > const& str, in appendSegmentMatches()
312 appendSegmentMatches(StringSet<TString, Dependent<TSpec> > const& str, in appendSegmentMatches()
326 appendSegmentMatches(StringSet<TString, Dependent<TSpec> > const& str, in appendSegmentMatches()
340 appendSegmentMatches(StringSet<TString, Dependent<TSpec> > const& str, in appendSegmentMatches()
406 StringSet<TString, TSpec2>& pairSet, in _setDistanceValue()
435 StringSet<TString, TSpec2>& pairSet, in _setDistanceValue()
462 StringSet<TString, TSpec2>&, in _setDistanceValue()
[all …]

12345678910>>...19