Searched defs:TSwiftPattern (Results 1 – 8 of 8) sorted by relevance
| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/tests/index/ |
| H A D | test_index_swift.cpp | 18 typedef Pattern<TQGramIndex, Swift<SwiftSemiGlobal> > TSwiftPattern; in SEQAN_DEFINE_TEST() typedef
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/razers3/ |
| H A D | razers_window.h | 89 typedef Pattern<TReadIndex, Swift<TSwiftSpec> > TSwiftPattern; in _mapSingleReadsToContigWindow() typedef
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| /dports/biology/seqan1/seqan-1.3.1/apps/razers/ |
| H A D | razers_parallel.h | 222 typedef Pattern<TReadIndex, Swift<TSwiftSpec> > TSwiftPattern; in findReads() typedef
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| H A D | razers_spliced.h | 1568 typedef Pattern<TIndex, Swift<TSwiftSpec> > TSwiftPattern; // filter in mapSplicedReads() typedef
1754 typedef Pattern<TReadIndex, Swift<TSwiftSpec> > TSwiftPattern; in mapSplicedReads() typedef
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| /dports/biology/seqan1/seqan-1.3.1/apps/razers2/ |
| H A D | razers_parallel.h | 222 typedef Pattern<TReadIndex, Swift<TSwiftSpec> > TSwiftPattern; in findReads() typedef
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| /dports/biology/seqan1/seqan-1.3.1/apps/splazers/ |
| H A D | razers_parallel.h | 222 typedef Pattern<TReadIndex, Swift<TSwiftSpec> > TSwiftPattern; in findReads() typedef
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/splazers/ |
| H A D | razers_parallel.h | 222 typedef Pattern<TReadIndex, Swift<TSwiftSpec> > TSwiftPattern; in findReads() typedef
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/razers/ |
| H A D | razers_spliced.h | 1570 typedef Pattern<TIndex, Swift<TSwiftSpec> > TSwiftPattern; // filter in mapSplicedReads() typedef
1756 typedef Pattern<TReadIndex, Swift<TSwiftSpec> > TSwiftPattern; in mapSplicedReads() typedef
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