Searched defs:accnosFileName (Results 1 – 10 of 10) sorted by relevance
| /dports/biology/mothur/mothur-1.46.1/source/commands/ |
| H A D | getlineagecommand.cpp | 245 string accnosFileName = readTax(); //fills the set of names to get in execute() local
253 string accnosFileName = readConsTax(); in execute() local
324 int GetLineageCommand::runGetSeqs(string accnosFileName){ in runGetSeqs()
389 int GetLineageCommand::runGetOTUs(string accnosFileName){ in runGetOTUs()
439 string accnosFileName = outputFileName + ".accnos"; in readTax() local
499 string accnosFileName = outputFileName + ".accnos"; in readConsTax() local
|
| H A D | removelineagecommand.cpp | 253 string accnosFileName = readTax(); //fills the set of names to get in execute() local
260 string accnosFileName = readConsTax(); //writes accnos file with otuNames in execute() local
335 int RemoveLineageCommand::runRemoveSeqs(string accnosFileName){ in runRemoveSeqs()
400 int RemoveLineageCommand::runRemoveOTUs(string accnosFileName){ in runRemoveOTUs()
450 string accnosFileName = getOutputFileName("accnos", variables); in readTax() local
507 string accnosFileName = getOutputFileName("accnos", variables); in readConsTax() local
|
| H A D | chimerabellerophoncommand.cpp | 137 string accnosFileName = getOutputFileName("accnos", variables); in execute() local
|
| H A D | chimeraperseuscommand.cpp | 199 string accnosFileName; member
363 string accnosFileName = getOutputFileName("accnos", variables); in execute() local
524 string accnosFileName; member
807 int ChimeraPerseusCommand::deconvoluteResults(string outputFileName, string accnosFileName){ in deconvoluteResults()
|
| H A D | chimeraccodecommand.cpp | 147 string outputFileName, accnosFileName; in execute() local
|
| H A D | chimerapintailcommand.cpp | 225 string outputFileName, accnosFileName; in checkChiemras() local
|
| H A D | chimeraslayercommand.cpp | 318 string accnosFileName = getOutputFileName("accnos", variables); in execute() local
432 int ChimeraSlayerCommand::deconvoluteResults(string outputFileName, string accnosFileName, string t… in deconvoluteResults()
|
| H A D | chimeravsearchcommand.cpp | 463 string accnosFileName = getOutputFileName("accnos", variables); in execute() local
656 int ChimeraVsearchCommand::deconvoluteResults(string outputFileName, string accnosFileName, string … in deconvoluteResults()
|
| H A D | chimerauchimecommand.cpp | 593 string accnosFileName = getOutputFileName("accnos", variables); in execute() local
764 int ChimeraUchimeCommand::deconvoluteResults(string outputFileName, string accnosFileName, string a… in deconvoluteResults()
|
| H A D | aligncommand.cpp | 229 string accnosFileName = getOutputFileName("accnos", variables); in execute() local
|