| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/ |
| H A D | apply_object.cpp | 179 CSeq_annot_CI annot_ci(parent_seh, CSeq_annot_CI::eSearch_entry); in ApplyChange() local
210 CSeq_annot_CI annot_ci(m_SEH, CSeq_annot_CI::eSearch_entry); in ApplyChange() local
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| H A D | seq_entry_edit.cpp | 648 CSeq_annot_CI annot_ci( bioseq_set, CSeq_annot_CI::eSearch_entry ); in s_IsSingletonSet() local
853 CSeq_annot_CI annot_ci( orig_parent, CSeq_annot_CI::eSearch_entry ); in s_MakeGroupsForUniqueValues() local
1336 CSeq_annot_CI annot_ci(input_entry_h, CSeq_annot_CI::eSearch_entry ); in DivvyUpAlignments() local
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| H A D | cds_fix.cpp | 1001 CSeq_annot_CI annot_ci(nuc_seh, CSeq_annot_CI::eSearch_entry); in DemoteCDSToNucSeq() local
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/edit/ |
| H A D | apply_object.cpp | 179 CSeq_annot_CI annot_ci(parent_seh, CSeq_annot_CI::eSearch_entry); in ApplyChange() local
210 CSeq_annot_CI annot_ci(m_SEH, CSeq_annot_CI::eSearch_entry); in ApplyChange() local
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| H A D | seq_entry_edit.cpp | 648 CSeq_annot_CI annot_ci( bioseq_set, CSeq_annot_CI::eSearch_entry ); in s_IsSingletonSet() local
853 CSeq_annot_CI annot_ci( orig_parent, CSeq_annot_CI::eSearch_entry ); in s_MakeGroupsForUniqueValues() local
1336 CSeq_annot_CI annot_ci(input_entry_h, CSeq_annot_CI::eSearch_entry ); in DivvyUpAlignments() local
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| H A D | cds_fix.cpp | 1001 CSeq_annot_CI annot_ci(nuc_seh, CSeq_annot_CI::eSearch_entry); in DemoteCDSToNucSeq() local
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/format/ |
| H A D | context.cpp | 694 CAnnot_CI annot_ci(m_Handle, sel); in x_CheckForShowComments() local
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| H A D | flat_file_generator.cpp | 416 CSeq_annot_CI annot_ci(bh); in Generate() local
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| H A D | gather_items.cpp | 1709 CAnnot_CI annot_ci(ctx.GetHandle(), ctx.SetAnnotSelector()); in x_AnnotComments() local
1778 CSeq_annot_CI annot_ci( curr_entry_h, CSeq_annot_CI::eSearch_entry ); in x_GetAnnotDescStrucCommentFromBioseqHandle() local
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/format/ |
| H A D | context.cpp | 694 CAnnot_CI annot_ci(m_Handle, sel); in x_CheckForShowComments() local
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| H A D | flat_file_generator.cpp | 415 CSeq_annot_CI annot_ci(bh); in Generate() local
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| H A D | gather_items.cpp | 1709 CAnnot_CI annot_ci(ctx.GetHandle(), ctx.SetAnnotSelector()); in x_AnnotComments() local
1778 CSeq_annot_CI annot_ci( curr_entry_h, CSeq_annot_CI::eSearch_entry ); in x_GetAnnotDescStrucCommentFromBioseqHandle() local
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/table2asn/ |
| H A D | feature_table_reader.cpp | 1469 CSeq_annot_CI annot_ci(m_seh, CSeq_annot_CI::eSearch_entry); in AddFeature() local
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/misc/discrepancy/ |
| H A D | feature_tests.cpp | 2176 CSeq_annot_CI annot_ci(bsh.GetParentEntry(), CSeq_annot_CI::eSearch_entry); in GetAnnotHandle() local
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objmgr/util/ |
| H A D | create_defline.cpp | 3879 CSeq_annot_CI annot_ci(bsh); in GenerateDefline() local
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| H A D | feature.cpp | 3952 CSeq_annot_CI annot_ci(parent_seh, CSeq_annot_CI::eSearch_entry); in PromoteCDSToNucProtSet() local
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objmgr/util/ |
| H A D | create_defline.cpp | 3873 CSeq_annot_CI annot_ci(bsh); in GenerateDefline() local
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| H A D | feature.cpp | 3952 CSeq_annot_CI annot_ci(parent_seh, CSeq_annot_CI::eSearch_entry); in PromoteCDSToNucProtSet() local
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/cleanup/ |
| H A D | newcleanupp.cpp | 377 CSeq_annot_CI annot_ci( bsh ); in BasicCleanupBioseqHandle() local
428 CSeq_annot_CI annot_ci( bssh ); in BasicCleanupBioseqSetHandle() local
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| H A D | cleanup.cpp | 4861 CSeq_annot_CI annot_ci(bh); in AddIRDMiscFeature() local
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/cleanup/ |
| H A D | newcleanupp.cpp | 377 CSeq_annot_CI annot_ci( bsh ); in BasicCleanupBioseqHandle() local
428 CSeq_annot_CI annot_ci( bssh ); in BasicCleanupBioseqSetHandle() local
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| H A D | cleanup.cpp | 4861 CSeq_annot_CI annot_ci(bh); in AddIRDMiscFeature() local
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