Searched defs:bad_aligns (Results 1 – 3 of 3) sorted by relevance
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/gnomon/ |
| H A D | annot.cpp | 92 …lyBadAlignments(TGeneModelList& aligns, TGeneModelList& suspect_aligns, TGeneModelList& bad_aligns, in TryWithoutObviouslyBadAlignments()
137 …onAnnotator::TryToEliminateOneAlignment(TGeneModelList& suspect_aligns, TGeneModelList& bad_aligns, in TryToEliminateOneAlignment()
165 …tator::TryToEliminateAlignmentsFromTail(TGeneModelList& suspect_aligns, TGeneModelList& bad_aligns, in TryToEliminateAlignmentsFromTail()
187 …ostwall, bool rightmostwall, bool leftmostanchor, bool rightmostanchor, TGeneModelList& bad_aligns) in Predict()
411 void CGnomonAnnotator::Predict(TGeneModelList& models, TGeneModelList& bad_aligns) in Predict()
635 void CGnomonAnnotator::Predict(TGeneModelList& models, TGeneModelList& bad_aligns, TSignedSeqPos le… in Predict()
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| H A D | select_alignments_alt.cpp | 176 void CGeneSelector::FilterGenes(TGeneModelList& chains, TGeneModelList& bad_aligns, in FilterGenes()
214 TGeneModelList CGeneSelector::FilterGenes(TGeneModelList& chains, TGeneModelList& bad_aligns) in FilterGenes()
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| H A D | chainer.cpp | 1188 TChainPointerList bad_aligns; in FindGenes() local
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