Home
last modified time | relevance | path

Searched defs:bns (Results 1 – 25 of 231) sorted by relevance

12345678910

/dports/lang/mosml/mosml-ver-2.10.1/src/compiler/
H A DTypes.sml403 val (bns,bvs,st) = value
459 let val (bns,bvs,sconenv,cconenv) = value
493 let val (bns,bvs,shared,tau'') = value
571 val (bns,bvs,styfun,ctyfun) = value
612 val (bns,bvs,styfun',ctyfun') = value
614 val bns = restrictBns bns [tn2tn'] value
686 val (bns,bvs,sconenv',cconenv') = value
688 val bns = restrictBns bns [tn2tn'] value
771 val bns = restrictBns bns T2T' value
782 val bns = restrictBns bns T2T' value
[all …]
/dports/lang/mosml/mosml-ver-2.10.1/src/compiler.cminusminus/
H A DTypes.sml394 val (bns,bvs,st) = value
450 let val (bns,bvs,sconenv,cconenv) = value
484 let val (bns,bvs,shared,tau'') = value
562 val (bns,bvs,styfun,ctyfun) = value
603 val (bns,bvs,styfun',ctyfun') = value
605 val bns = restrictBns bns [tn2tn'] value
677 val (bns,bvs,sconenv',cconenv') = value
679 val bns = restrictBns bns [tn2tn'] value
762 val bns = restrictBns bns T2T' value
773 val bns = restrictBns bns T2T' value
[all …]
/dports/biology/bwa/bwa-0.7.17/
H A Dbntseq.c66 void bns_dump(const bntseq_t *bns, const char *prefix) in bns_dump()
103 bntseq_t *bns; in bns_restore_core() local
173 bntseq_t *bns; in bns_restore() local
208 void bns_destroy(bntseq_t *bns) in bns_destroy()
227 static uint8_t *add1(const kseq_t *seq, bntseq_t *bns, uint8_t *pac, int64_t *m_pac, int *m_seqs, i… in add1()
280 bntseq_t *bns; in bns_fasta2bntseq() local
349 int bns_pos2rid(const bntseq_t *bns, int64_t pos_f) in bns_pos2rid()
365 int bns_intv2rid(const bntseq_t *bns, int64_t rb, int64_t re) in bns_intv2rid()
375 int bns_cnt_ambi(const bntseq_t *bns, int64_t pos_f, int len, int *ref_id) in bns_cnt_ambi()
421 uint8_t *bns_fetch_seq(const bntseq_t *bns, const uint8_t *pac, int64_t *beg, int64_t mid, int64_t … in bns_fetch_seq()
H A Dbwase.c112 bwtint_t bwa_sa2pos(const bntseq_t *bns, const bwt_t *bwt, bwtint_t sapos, int ref_len, int *strand) in bwa_sa2pos()
131 void bwa_cal_pac_pos_core(const bntseq_t *bns, const bwt_t *bwt, bwa_seq_t *seq, const int max_mm, … in bwa_cal_pac_pos_core()
144 void bwa_cal_pac_pos(const bntseq_t *bns, const char *prefix, int n_seqs, bwa_seq_t *seqs, int max_… in bwa_cal_pac_pos()
287 void bwa_refine_gapped(const bntseq_t *bns, int n_seqs, bwa_seq_t *seqs, ubyte_t *_pacseq) in bwa_refine_gapped()
386 void bwa_print_sam1(const bntseq_t *bns, bwa_seq_t *p, const bwa_seq_t *mate, int mode, int max_top… in bwa_print_sam1()
516 bntseq_t *bns; in bwa_sai2sam_se_core() local
H A Dbwtsw2_aux.c248 static bwtsw2_t *bsw2_aln1_core(const bsw2opt_t *opt, const bntseq_t *bns, uint8_t *pac, const bwt_… in bsw2_aln1_core()
326 static int fix_cigar(const bntseq_t *bns, bsw2hit_t *p, int n_cigar, uint32_t *cigar) in fix_cigar()
399 static void write_aux(const bsw2opt_t *opt, const bntseq_t *bns, int qlen, uint8_t *seq[2], const u… in write_aux()
477 static void print_hits(const bntseq_t *bns, const bsw2opt_t *opt, bsw2seq1_t *ks, bwtsw2_t *b, int … in print_hits()
561 static void bsw2_aln_core(bsw2seq_t *_seq, const bsw2opt_t *_opt, const bntseq_t *bns, uint8_t *pac… in bsw2_aln_core()
651 const bntseq_t *bns; member
667 static void process_seqs(bsw2seq_t *_seq, const bsw2opt_t *opt, const bntseq_t *bns, uint8_t *pac, … in process_seqs()
727 void bsw2_aln(const bsw2opt_t *opt, const bntseq_t *bns, bwt_t * const target, const char *fn, cons… in bsw2_aln()
H A Dbwamem.c234 void mem_print_chain(const bntseq_t *bns, mem_chain_v *chn) in mem_print_chain()
251 mem_chain_v mem_chain(const mem_opt_t *opt, const bwt_t *bwt, const bntseq_t *bns, int len, const u… in mem_chain()
437 int mem_sort_dedup_patch(const mem_opt_t *opt, const bntseq_t *bns, const uint8_t *pac, uint8_t *qu… in mem_sort_dedup_patch()
571 int mem_seed_sw(const mem_opt_t *opt, const bntseq_t *bns, const uint8_t *pac, int l_query, const u… in mem_seed_sw()
598 void mem_flt_chained_seeds(const mem_opt_t *opt, const bntseq_t *bns, const uint8_t *pac, int l_que… in mem_flt_chained_seeds()
632 void mem_chain2aln(const mem_opt_t *opt, const bntseq_t *bns, const uint8_t *pac, int l_query, cons… in mem_chain2aln()
825 void mem_aln2sam(const mem_opt_t *opt, const bntseq_t *bns, kstring_t *str, bseq1_t *s, int n, cons… in mem_aln2sam()
1003 void mem_reg2sam(const mem_opt_t *opt, const bntseq_t *bns, const uint8_t *pac, bseq1_t *s, mem_aln… in mem_reg2sam()
1051 mem_alnreg_v mem_align1_core(const mem_opt_t *opt, const bwt_t *bwt, const bntseq_t *bns, const uin… in mem_align1_core()
1089 mem_aln_t mem_reg2aln(const mem_opt_t *opt, const bntseq_t *bns, const uint8_t *pac, int l_query, c… in mem_reg2aln()
[all …]
H A Dbwamem_extra.c76 mem_alnreg_v mem_align1(const mem_opt_t *opt, const bwt_t *bwt, const bntseq_t *bns, const uint8_t … in mem_align1()
98 char **mem_gen_alt(const mem_opt_t *opt, const bntseq_t *bns, const uint8_t *pac, const mem_alnreg_… in mem_gen_alt()
H A Dbwamem_pair.c111 int mem_matesw(const mem_opt_t *opt, const bntseq_t *bns, const uint8_t *pac, const mem_pestat_t pe… in mem_matesw()
182 int mem_pair(const mem_opt_t *opt, const bntseq_t *bns, const uint8_t *pac, const mem_pestat_t pes[… in mem_pair()
250 int mem_sam_pe(const mem_opt_t *opt, const bntseq_t *bns, const uint8_t *pac, const mem_pestat_t pe… in mem_sam_pe()
/dports/games/supertuxkart/SuperTuxKart-1.2-src/src/tracks/
H A Dcheck_structure.cpp247 void CheckStructure::saveCompleteState(BareNetworkString* bns) in saveCompleteState()
270 void CheckStructure::saveIsActive(int kart_id, BareNetworkString* bns) in saveIsActive()
H A Dtrack_sector.cpp199 void TrackSector::saveCompleteState(BareNetworkString* bns) in saveCompleteState()
/dports/games/supertuxkart/SuperTuxKart-1.2-src/src/network/
H A Dcompress_network_body.hpp63 BareNetworkString* bns = NULL) in compress()
88 inline void decompress(const BareNetworkString* bns, in decompress()
/dports/games/supertuxkart/SuperTuxKart-1.2-src/src/items/
H A Dnetwork_item_manager.hpp88 virtual void rewindToEvent(BareNetworkString *bns) OVERRIDE {}; in rewindToEvent()
/dports/devel/gettext-tools/gettext-0.21/gettext-tools/gnulib-tests/
H A Dnap.h42 int bns = b.tv_nsec; in diff_timespec() local
/dports/dns/libidn/libidn-1.35/gltests/
H A Dnap.h42 int bns = b.tv_nsec; in diff_timespec() local
/dports/sysutils/coreutils/coreutils-8.32/gnulib-tests/
H A Dnap.h42 int bns = b.tv_nsec; in diff_timespec() local
/dports/security/gnutls/gnutls-3.6.16/gl/tests/
H A Dnap.h42 int bns = b.tv_nsec; in diff_timespec() local
/dports/devel/gettext-runtime/gettext-0.21/gettext-tools/gnulib-tests/
H A Dnap.h42 int bns = b.tv_nsec; in diff_timespec() local
/dports/devel/gettext-po-mode/gettext-0.21/gettext-tools/gnulib-tests/
H A Dnap.h42 int bns = b.tv_nsec; in diff_timespec() local
/dports/devel/libtextstyle/gettext-0.21/gettext-tools/gnulib-tests/
H A Dnap.h42 int bns = b.tv_nsec; in diff_timespec() local
/dports/textproc/gsed/sed-4.8/gnulib-tests/
H A Dnap.h42 int bns = b.tv_nsec; in diff_timespec() local
/dports/misc/gnuls/coreutils-8.30/gnulib-tests/
H A Dnap.h42 int bns = b.tv_nsec; in diff_timespec() local
/dports/textproc/augeas/augeas-1.12.0/gnulib/tests/
H A Dnap.h42 int bns = b.tv_nsec; in diff_timespec() local
/dports/astro/gnuastro/gnuastro-0.16/bootstrapped/tests/
H A Dnap.h49 int bns = b.tv_nsec; in diff_timespec() local
/dports/security/libgsasl/gsasl-1.10.0/gltests/
H A Dnap.h49 int bns = b.tv_nsec; in diff_timespec() local
/dports/security/libgsasl/gsasl-1.10.0/lib/gltests/
H A Dnap.h49 int bns = b.tv_nsec; in diff_timespec() local

12345678910