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Searched defs:calcDelScore (Results 1 – 6 of 6) sorted by relevance

/dports/biology/bbmap/bbmap/current/aligner/
H A DSingleStateAlignerFlat2.java464 private static int calcDelScore(int len){ in calcDelScore() method in SingleStateAlignerFlat2
H A DSingleStateAlignerFlat3.java462 private static int calcDelScore(int len){ in calcDelScore() method in SingleStateAlignerFlat3
H A DSingleStateAlignerFlat2Amino.java532 private static int calcDelScore(int len){ in calcDelScore() method in SingleStateAlignerFlat2Amino
H A DSingleStateAlignerFlat2_1D.java438 private static int calcDelScore(int len){ in calcDelScore() method in SingleStateAlignerFlat2_1D
H A DSingleStateAlignerFlatFloat.java505 private static float calcDelScore(int len){ in calcDelScore() method in SingleStateAlignerFlatFloat
/dports/biology/bbmap/bbmap/current/align2/
H A DMSA.java679 public abstract int calcDelScore(int len, boolean approximateGaps); in calcDelScore() method in MSA