Searched defs:chstate (Results 1 – 7 of 7) sorted by relevance
402 void ResimArranger::Rearrange(ChainState & chstate) in Rearrange()463 double ResimArranger::Hastings(ChainState & chstate) in Hastings()492 void DeNovoArranger::Rearrange(ChainState & chstate) in Rearrange()589 void HapArranger::Rearrange(ChainState & chstate) in Rearrange()607 void ProbHapArranger::Rearrange(ChainState & chstate) in Rearrange()794 double TreeSizeArranger::Hastings(ChainState & chstate) in Hastings()845 void EpochSizeArranger::Rearrange(ChainState & chstate) in Rearrange()976 double EpochSizeArranger::Hastings(ChainState & chstate) in Hastings()1088 void BayesArranger::Rearrange(ChainState & chstate) in Rearrange()1191 void LocusArranger::Rearrange(ChainState & chstate) in Rearrange()[all …]
102 void CollectionManager::Collect(ChainState& chstate, long initialOrFinal, bool lastchain) in Collect()119 void CollectionManager::WriteTraceFile(ChainState& chstate, long initialOrFinal) in WriteTraceFile()157 void CollectionManager::WriteNewickTreeFile(ChainState& chstate) in WriteNewickTreeFile()182 void CollectionManager::WriteRecSitesFile(ChainState& chstate, bool lastchain) in WriteRecSitesFile()237 void CollectionManager::WriteArgFile(ChainState& chstate, bool lastchain) in WriteArgFile()
66 void TreeCollector::Score(ChainState& chstate) in Score()181 void ParamCollector::Score(ChainState& chstate) in Score()313 void MapCollector::Score(ChainState& chstate) in Score()
45 virtual void UpdateArrangers(ArrangerVec& arrangers, ChainState& chstate) const { }; in UpdateArrangers()
131 void TemperatureIdentity::Sample(CollectionManager& collmanager, ChainState & chstate, long initial… in Sample()
357 virtual void Rearrange(ChainState & chstate) {}; in Rearrange()358 virtual void ScoreRearrangement(ChainState & chstate) {}; in ScoreRearrangement()
265 int chstate; in n_connect_response() local