| /dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/Perl/ |
| H A D | RNA_wrap.cpp | 2925 …etaScale_get(),int const pf_smooth=vrna_md_defaults_pf_smooth_get(),int const dangles=vrna_md_defa… in new_vrna_md_t__SWIG_0()
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| /dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/Python/ |
| H A D | RNA.py | 1796 dangles = property(_RNA.md_dangles_get, _RNA.md_dangles_set) variable in md
2323 def E_IntLoop_Co(type, type_2, i, j, p, q, cutpoint, si1, sj1, sp1, sq1, dangles, P): argument
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| H A D | RNA_wrap.cpp | 7054 …etaScale_get(),int const pf_smooth=vrna_md_defaults_pf_smooth_get(),int const dangles=vrna_md_defa… in new_vrna_md_t()
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| /dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/Python3/ |
| H A D | RNA.py | 1796 dangles = property(_RNA.md_dangles_get, _RNA.md_dangles_set) variable in md
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| H A D | RNA_wrap.cpp | 7059 …etaScale_get(),int const pf_smooth=vrna_md_defaults_pf_smooth_get(),int const dangles=vrna_md_defa… in new_vrna_md_t()
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| /dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/ |
| H A D | model_details.i | 21 int dangles; member
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| /dports/biology/viennarna/ViennaRNA-2.4.18/src/ViennaRNA/ |
| H A D | 2Dfold.c | 386 …int cnt1, cnt2, cnt3, cnt4, d1, d2, energy, dangles, temp2, type, additional_en, *my_iin… in mfe_linear() local
1442 int *my_iindx, *jindx, energy, type, dangles, cnt1, cnt2, cnt3, cnt4, turn; in backtrack_f5() local
1654 …int *my_iindx, *jindx, type, type_2, energy, no_close, dangles, base_d1, base_d2, d1, d2… in backtrack_c() local
1946 int *my_iindx, *jindx, type, energy, dangles, circ, cnt1, cnt2, cnt3, cnt4, turn; in backtrack_m() local
2243 int ***E_C, ***E_M1, *E_C_rem, *E_M1_rem, type, dangles, circ, energy, e_m1; in backtrack_m1() local
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| H A D | 2Dfold.h | 154 int dangles; member
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| H A D | 2Dpfold.h | 183 int dangles; member
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| H A D | gquad.h | 315 int energy, dangles, *idx, ij, p, q, maxl, minl, c0, l1, *ggg; in vrna_BT_gquad_int() local
436 int energy, dangles, k, l, maxl, minl, c0, l1; in backtrack_GQuad_IntLoop() local
539 int energy, dangles, k, l, maxl, minl, c0, l1, ss, tt, u1, u2, eee; in backtrack_GQuad_IntLoop_comparative() local
679 int energy, dangles, k, l, maxl, minl, c0, l1; in backtrack_GQuad_IntLoop_L() local
909 int energy, ge, dangles, p, q, l1, minq, maxq, c0; in E_GQuad_IntLoop() local
1317 int energy, *ge, dangles, p, q, l1, minq, maxq, c0; in E_GQuad_IntLoop_exhaustive() local
1425 int energy, ge, dangles, p, q, l1, minq, maxq, c0; in E_GQuad_IntLoop_L() local
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| H A D | mfe_window.c | 1293 int n, i_local, j_local, ediff, dangles; in update_block() local
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| H A D | model.c | 51 int dangles = VRNA_MODEL_DEFAULT_DANGLES; variable
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| H A D | model.h | 184 …int dangles; /**< @brief Specifies the dangle model used in any ene… member
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| /dports/biology/viennarna/ViennaRNA-2.4.18/src/ViennaRNA/loops/ |
| H A D | internal.h | 664 int dangles, in E_IntLoop_Co()
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| /dports/biology/viennarna/ViennaRNA-2.4.18/src/bin/ |
| H A D | RNAdos.c | 388 int dangles = P->model_details.dangles; in compute_density_of_states() local
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| /dports/cad/opencascade/opencascade-7.6.0/src/DNaming/ |
| H A D | DNaming.cxx | 351 TopTools_DataMapOfShapeShape dangles; in LoadGeneratedDangleShapes() local
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| /dports/databases/grass7/grass-7.8.6/lib/vector/Vlib/ |
| H A D | dangles.c | 125 static void dangles(struct Map_info *Map, int type, int option, in dangles() function
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| /dports/games/qudos/QuDos-0.40.1-src/src/mods/zaero/ |
| H A D | z_acannon.c | 276 vec3_t dangles; in canShoot() local
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| /dports/graphics/geos/geos-3.9.1/capi/ |
| H A D | geos_c.cpp | 774 GEOSGeometry** cuts, GEOSGeometry** dangles, GEOSGeometry** invalid) in GEOSPolygonize_full()
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| H A D | geos_ts_c.cpp | 1974 Geometry** cuts, Geometry** dangles, Geometry** invalid) in GEOSPolygonize_full_r()
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| /dports/graphics/geos/geos-3.9.1/include/geos/operation/polygonize/ |
| H A D | Polygonizer.h | 131 std::vector<const geom::LineString*> dangles; variable
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| /dports/graphics/php-geos/php-geos/ |
| H A D | geos.c | 3063 GEOSGeometry *dangles; in PHP_FUNCTION() local
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| /dports/graphics/py-pygeos/pygeos-0.10.2/src/ |
| H A D | ufuncs.c | 1881 GEOSGeometry* dangles = NULL; in polygonize_full_func() local
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| /dports/graphics/reallyslick/rss-glx_0.9.1/src/PixelCity/ |
| H A D | Car.cpp | 45 static int dangles[] = { 0, 90, 180, 270}; variable
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| /dports/math/jts/jts-jts-1.18.1/modules/core/src/main/java/org/locationtech/jts/operation/polygonize/ |
| H A D | Polygonizer.java | 78 protected Collection dangles = new ArrayList(); field in Polygonizer
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