| /dports/biology/mmseqs2/MMseqs2-13-45111/src/clustering/ |
| H A D | AlignmentSymmetry.h | 18 static void computeOffsetFromCounts(T* elementSizes, size_t dbSize) { in computeOffsetFromCounts()
33 unsigned int dbSize, size_t totalElementCount) { in setupPointers()
|
| H A D | AlignmentSymmetry.cpp | 24 const size_t dbSize = seqDbr->getSize(); in readInData() local
123 …issingLinks(unsigned int ** elementLookupTable, size_t * offsetTable, size_t dbSize, int threads) { in findMissingLinks()
168 …ize_t * offsetTableWithOutNewLinks, size_t * offsetTableWithNewLinks, size_t dbSize, unsigned shor… in addMissingLinks()
218 …tSymmetry::sortElements(unsigned int **elementLookupTable, size_t *elementOffsets, size_t dbSize) { in sortElements()
|
| H A D | Clustering.cpp | 61 size_t dbSize = alnDbr->getSize(); in run() local
85 …ering::writeData(DBWriter *dbw, const std::pair<unsigned int, unsigned int> * ret, size_t dbSize) { in writeData()
|
| H A D | ClusteringAlgorithms.h | 30 unsigned int dbSize; variable
|
| /dports/java/berkeley-db/je-6.2.31/test/standalone/ |
| H A D | ReplicationCleaning.java | 37 private int dbSize = 2000; field in ReplicationCleaning
59 RepTestData.insertData(Utils.openStore(master, Utils.DB_NAME), dbSize); in doRampup() local
|
| H A D | RepTestData.java | 78 public static void insertData(EntityStore dbStore, int dbSize) in insertData()
91 int dbSize, in insertData()
|
| H A D | ReplicaFailover.java | 45 private int dbSize = 2000; field in ReplicaFailover
75 RepTestData.insertData(Utils.openStore(master, Utils.DB_NAME), dbSize); in doRampup() local
|
| H A D | ReplicaDbOps.java | 43 private long dbSize = 20; field in ReplicaDbOps
|
| H A D | TemporaryDbStress.java | 44 private int dbSize = 20000; field in TemporaryDbStress
|
| H A D | ReplicaReading.java | 101 private int dbSize = 300; field in ReplicaReading
143 (Utils.openStore(master, Utils.DB_NAME), dbSize, true); in doRampup() local
|
| /dports/biology/mmseqs2/MMseqs2-13-45111/src/util/ |
| H A D | summarizeresult.cpp | 22 size_t dbSize = 0; in summarizeresult() local
30 size_t dbSize = reader.getSize(); in summarizeresult() local
|
| H A D | summarizetabs.cpp | 130 const size_t dbFrom, const size_t dbSize, bool merge) { in doAnnotate()
187 size_t dbSize = 0; in doAnnotate() local
|
| /dports/java/berkeley-db/je-6.2.31/test/com/sleepycat/je/dbi/ |
| H A D | DbEnvPoolTest.java | 167 private final int dbSize; field in DbEnvPoolTest.OpenEnvThread
174 int dbSize) { in OpenEnvThread()
|
| /dports/sysutils/kf5-baloo/baloo-5.89.0/tests/engine/ |
| H A D | writeiotest.cpp | 68 int dbSize = 0; in main() local
|
| /dports/www/squid/squid-4.15/src/fs/rock/ |
| H A D | RockRebuild.h | 78 int64_t dbSize; variable
|
| /dports/biology/mmseqs2/MMseqs2-13-45111/src/prefiltering/ |
| H A D | IndexBuilder.cpp | 27 size_t dbSize = dbTo - dbFrom; in DbInfo() local
62 size_t dbSize = dbTo - dbFrom; in fillDatabase() local
|
| H A D | ungappedprefilter.cpp | 23 …meters &par, DBReader<unsigned int> &qdbr, DBWriter &resultWriter, size_t dbStart, size_t dbSize) { in doRescorealldiagonal()
176 size_t dbSize = 0; in ungappedprefilter() local
|
| H A D | Prefiltering.cpp | 499 void Prefiltering::getIndexTable(int split, size_t dbFrom, size_t dbSize) { in getIndexTable()
708 size_t dbSize = tdbr->getSize(); in runSplit() local
1018 size_t Prefiltering::estimateMemoryConsumption(int split, size_t dbSize, size_t resSize, in estimateMemoryConsumption()
1050 size_t Prefiltering::estimateHDDMemoryConsumption(size_t dbSize, size_t maxResListLen) { in estimateHDDMemoryConsumption()
|
| /dports/net/akonadi-search/akonadi-search-21.12.3/xapian/tests/ |
| H A D | writeiotest.cpp | 61 int dbSize = 0; in main() local
|
| /dports/java/berkeley-db/je-6.2.31/test/com/sleepycat/je/rep/util/ldiff/ |
| H A D | WindowTest.java | 59 final int dbSize = 2 * blockSize; in testRollingChecksum() local
|
| H A D | LDiffServiceTest.java | 98 int dbSize, in insertData()
|
| /dports/www/squid/squid-4.15/src/security/cert_generators/file/ |
| H A D | certificate_db.cc | 318 size_t dbSize = size(); local
402 size_t dbSize = 0; local
456 size_t dbSize = readSize(); local
463 size_t dbSize = readSize(); local
|
| /dports/biology/mmseqs2/MMseqs2-13-45111/src/alignment/ |
| H A D | Alignment.cpp | 229 size_t dbSize = 0; in run() local
255 …string &outDB, const std::string &outDBIndex, const size_t dbFrom, const size_t dbSize, bool merge… in run()
551 size_t Alignment::estimateHDDMemoryConsumption(int dbSize, int maxSeqs) { in estimateHDDMemoryConsumption()
|
| /dports/biology/mmseqs2/MMseqs2-13-45111/src/test/ |
| H A D | TestProfileAlignment.cpp | 832 size_t dbSize = 30*pow(10,6); in main() local
|
| H A D | TestAlignment.cpp | 151 size_t dbSize = (qL * 11000000 * dbL); in main() local
|