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Searched defs:derv2 (Results 1 – 10 of 10) sorted by relevance

/dports/biology/iqtree/IQ-TREE-2.0.6/alignment/
H A Dalignmentpairwise.cpp192 double derv1, derv2; in computeFuncDerv() local
212 double derv1, derv2; in computeFuncDerv() local
232 double derv1 = 0.0, derv2 = 0.0; in computeFuncDerv() local
/dports/biology/iqtree/IQ-TREE-2.0.6/model/
H A Dmodelset.h86 …virtual double computeTrans(double time, int state1, int state2, double &derv1, double &derv2) { r… in computeTrans()
H A Dmodelsubst.cpp91 double ModelSubst::computeTrans(double time, int state1, int state2, double &derv1, double &derv2) { in computeTrans()
105 …st::computeTrans(double time, int model_id, int state1, int state2, double &derv1, double &derv2) { in computeTrans()
H A Dmodelset.cpp80 …et::computeTrans(double time, int model_id, int state1, int state2, double &derv1, double &derv2) { in computeTrans()
H A Dratemeyerhaeseler.cpp425 double trans, derv1, derv2; in computeFuncDerv() local
H A Dratemeyerdiscrete.cpp338 double derv1 = 0.0, derv2 = 0.0; in computeFuncDerv() local
H A Dmodelgtr.cpp282 double ModelGTR::computeTrans(double time, int state1, int state2, double &derv1, double &derv2) { in computeTrans()
H A Dmodelfactory.cpp1395 double ModelFactory::computeTrans(double time, int state1, int state2, double &derv1, double &derv2 in computeTrans()
H A Dmodelmarkov.cpp535 double ModelMarkov::computeTrans(double time, int state1, int state2, double &derv1, double &derv2)… in computeTrans()
/dports/biology/iqtree/IQ-TREE-2.0.6/obsolete/
H A Dngs.cpp218 double derv1 = 0.0, derv2 = 0.0; in computeFuncDervCat() local
552 double trans, derv1, derv2; in computeFuncDerv() local