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Searched defs:expectedCoverage (Results 1 – 9 of 9) sorted by relevance

/dports/biology/canu/canu-2.2/src/correction/
H A DcomputeGlobalScore.C27 uint32 expectedCoverage, in compute()
141 uint32 expectedCoverage) { in estimate()
H A DgenerateCorrectionLayouts.C43 uint32 expectedCoverage, in loadThresholds()
183 …uint32 expectedCoverage = 40; // How many overlaps per read to save, global filt… in main() local
H A DfilterCorrectionOverlaps.C62 uint32 expectedCoverage = 25; in main() local
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/Velvet-1.1.06/
H A Drun2.c85 double expectedCoverage = -1; in main() local
/dports/biology/velvet/velvet_1.2.10/src/
H A Drun2.c91 double expectedCoverage = -1; in main() local
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-v0.3.1/src/
H A Drun2.c77 double expectedCoverage = -1; in main() local
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/Apps/
H A Dmeta-velvetg.hh51 double expectedCoverage; member in MetaVelvetG
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/VelvetAPI/
H A DVelvetGraph.cc83 void VelvetGraph::scaffoldingWithSinglePeakMode( double expectedCoverage, boolean* flagMatePair, bo… in scaffoldingWithSinglePeakMode()
/dports/security/hs-cryptol/cryptol-2.11.0/src/Cryptol/REPL/
H A DCommand.hs600 expectedCoverage testNum sz = function