| /dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/utils/smithwaterman/ |
| H A D | SmithWatermanAlignerAbstractUnitTest.java | 145 …ToRefComplexAlignment(final String reference, final String read, final int expectedStart, final St… in testReadAlignedToRefComplexAlignment()
161 final int expectedStart, final String expectedCigar) { in testOddNoAlignment()
171 final int expectedStart = 3; in testIndelsAtStartAndEnd() local
181 final int expectedStart = 14; in testDegenerateAlignmentWithIndelsAtBothEnds() local
246 …public void testSubstringMatch(int expectedStart, String expectedCigar, SWOverhangStrategy strateg… in testSubstringMatch()
254 …protected void assertAlignmentMatchesExpected(String reference, String read, int expectedStart, St… in assertAlignmentMatchesExpected()
258 Assert.assertEquals(alignment.getAlignmentOffset(), expectedStart); in assertAlignmentMatchesExpected() local
274 …public void testSubstringMatchLong(int expectedStart, String expectedCigar, SWOverhangStrategy str… in testSubstringMatchLong()
|
| /dports/biology/sra-tools/sra-tools-2.11.0/test/ngs-pileup/ |
| H A D | test-ngs-pileup.cpp | 78 …string expectedStart = "gi|169794206|ref|NC_010410.1|\t19376\t1\n"; //TODO: expand when pileup pri… in FIXTURE_TEST_CASE() local
86 string expectedStart = "AL844509.2\t1212494\t1"; //TODO: expand when pileup prints out more data in FIXTURE_TEST_CASE() local
95 string expectedStart = "AL844509.2\t1212494\t1"; //TODO: expand when pileup prints out more data in FIXTURE_TEST_CASE() local
|
| /dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/walkers/variantutils/ |
| H A D | LeftAlignAndTrimVariantsUnitTest.java | 100 final int expectedStart = expectRealigned ? repeatStart : indelIndex + 1; in LeftAlignTestData() local
128 …ntContext vc, final ReferenceContext ref, final boolean expectRealigned, final int expectedStart) { in testLeftAlign()
131 Assert.assertEquals(realignedV.getStart(), expectedStart); in testLeftAlign() local
|
| /dports/deskutils/timewarrior/timewarrior-1.4.3/test/basetest/ |
| H A D | testing.py | 17 expectedStart=None, argument
34 expectedStart=None, argument
52 expectedStart=None, argument
|
| /dports/devel/icu-lx/icu/source/test/intltest/ |
| H A D | formattedvaluetest.cpp | 227 int32_t expectedStart = expectedFieldPositions[i].beginIndex; in checkMixedFormattedValue() local
258 int32_t expectedStart = expectedFieldPositions[i].beginIndex; in checkMixedFormattedValue() local
294 int32_t expectedStart = expectedFieldPositions[i].beginIndex; in checkMixedFormattedValue() local
|
| /dports/devel/icu/icu/source/test/intltest/ |
| H A D | formattedvaluetest.cpp | 227 int32_t expectedStart = expectedFieldPositions[i].beginIndex; in checkMixedFormattedValue() local
258 int32_t expectedStart = expectedFieldPositions[i].beginIndex; in checkMixedFormattedValue() local
294 int32_t expectedStart = expectedFieldPositions[i].beginIndex; in checkMixedFormattedValue() local
|
| /dports/devel/spark/spark-2.1.1/sql/hive/src/test/scala/org/apache/spark/sql/hive/ |
| H A D | ErrorPositionSuite.scala | 154 val expectedStart = line.indexOf(token) constant
|
| /dports/math/apache-commons-math/commons-math3-3.6.1-src/src/test/java/org/apache/commons/math3/linear/ |
| H A D | SparseFieldVectorTest.java | 346 final int expectedStart = 2; in testWalkInDefaultOrderPreservingVisitor3() local
473 final int expectedStart = 2; in testWalkInOptimizedOrderPreservingVisitor3() local
604 final int expectedStart = 2; in testWalkInDefaultOrderChangingVisitor3() local
739 final int expectedStart = 2; in testWalkInOptimizedOrderChangingVisitor3() local
|
| H A D | ArrayFieldVectorTest.java | 761 final int expectedStart = 2; in testWalkInDefaultOrderPreservingVisitor3() local
888 final int expectedStart = 2; in testWalkInOptimizedOrderPreservingVisitor3() local
1019 final int expectedStart = 2; in testWalkInDefaultOrderChangingVisitor3() local
1154 final int expectedStart = 2; in testWalkInOptimizedOrderChangingVisitor3() local
|
| /dports/www/mediawiki137/mediawiki-1.37.1/tests/phpunit/includes/filebackend/filejournal/ |
| H A D | DBFileJournalIntegrationTest.php | 123 $expectedStart, $expectedCount, $expectedNext, array $args
|
| /dports/www/mediawiki136/mediawiki-1.36.3/tests/phpunit/includes/filebackend/filejournal/ |
| H A D | DBFileJournalIntegrationTest.php | 123 $expectedStart, $expectedCount, $expectedNext, array $args
|
| /dports/www/mediawiki135/mediawiki-1.35.5/tests/phpunit/includes/filebackend/filejournal/ |
| H A D | DBFileJournalIntegrationTest.php | 123 $expectedStart, $expectedCount, $expectedNext, array $args
|
| /dports/graphics/kphotoalbum/kphotoalbum-5.8.1/XMLDB/ |
| H A D | XmlReader.cpp | 31 ElementInfo XmlReader::readNextStartOrStopElement(const QString &expectedStart) in readNextStartOrStopElement()
|
| /dports/java/openjdk8/jdk8u-jdk8u312-b07.1/langtools/test/tools/javac/tree/ |
| H A D | T6993305.java | 111 int expectedStart = pos; in visitMethod() local
|
| /dports/java/openjdk8-jre/jdk8u-jdk8u312-b07.1/langtools/test/tools/javac/tree/ |
| H A D | T6993305.java | 111 int expectedStart = pos; in visitMethod() local
|
| /dports/java/openjdk12/openjdk-jdk12u-jdk-12.0.2-10-4/test/langtools/tools/javac/tree/ |
| H A D | T6993305.java | 114 int expectedStart = pos; in visitMethod() local
|
| /dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/test/langtools/tools/javac/tree/ |
| H A D | T6993305.java | 114 int expectedStart = pos; in visitMethod() local
|
| /dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/test/langtools/tools/javac/tree/ |
| H A D | T6993305.java | 114 int expectedStart = pos; in visitMethod() local
|
| /dports/java/openjdk15/jdk15u-jdk-15.0.6-1-1/test/langtools/tools/javac/tree/ |
| H A D | T6993305.java | 114 int expectedStart = pos; in visitMethod() local
|
| /dports/java/openjdk16/jdk16u-jdk-16.0.2-7-1/test/langtools/tools/javac/tree/ |
| H A D | T6993305.java | 114 int expectedStart = pos; in visitMethod() local
|
| /dports/java/openjdk14/jdk14u-jdk-14.0.2-12-1/test/langtools/tools/javac/tree/ |
| H A D | T6993305.java | 114 int expectedStart = pos; in visitMethod() local
|
| /dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/test/langtools/tools/javac/tree/ |
| H A D | T6993305.java | 114 int expectedStart = pos; in visitMethod() local
|
| /dports/java/openjdk17/jdk17u-jdk-17.0.1-12-1/test/langtools/tools/javac/tree/ |
| H A D | T6993305.java | 114 int expectedStart = pos; in visitMethod() local
|
| /dports/biology/ugene/ugene-40.1/src/plugins/CoreTests/src/ |
| H A D | FindPatternMsaTaskTest.cpp | 166 int expectedStart = expectedBoundsToken.first().toInt(&expectedStartOk); in init() local
|
| /dports/www/qt5-webengine/qtwebengine-everywhere-src-5.15.2/src/3rdparty/chromium/content/public/android/junit/src/org/chromium/content/browser/selection/ |
| H A D | SmartSelectionMetricsLoggerTest.java | 519 SelectionEvent event, int eventType, int expectedStart, int expectedEnd) { in assertEvent()
|