Home
last modified time | relevance | path

Searched defs:feat_list (Results 1 – 25 of 33) sorted by relevance

12

/dports/ftp/smbftpd/smbftpd-2.4/cmd/
H A Dcmd_feat.c23 struct feat_tab feat_list[] = { in cmd_feat() local
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/validator/
H A Dfeature_match.cpp59 const TFeatList & feat_list, CScope* scope, ENoteCDS eNoteCDS) in s_SetUpXrefPairs()
344 void CmRNAAndCDSIndex::SetBioseq(const std::vector<CMappedFeat> *feat_list, CScope* scope) in SetBioseq()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/
H A Dfield_handler.cpp200 vector<CConstRef<CSeq_feat> > feat_list; in s_GetProtFeatures() local
216 vector<CConstRef<CSeq_feat> > feat_list; in GetRelatedFeatures() local
H A Dcds_fix.cpp1019 … const list< CRef< CSeq_feat > > &feat_list = old_annot.GetSeq_annotCore()->GetData().GetFtable(); in DemoteCDSToNucSeq() local
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/edit/
H A Dfield_handler.cpp200 vector<CConstRef<CSeq_feat> > feat_list; in s_GetProtFeatures() local
216 vector<CConstRef<CSeq_feat> > feat_list; in GetRelatedFeatures() local
H A Dcds_fix.cpp1019 … const list< CRef< CSeq_feat > > &feat_list = old_annot.GetSeq_annotCore()->GetData().GetFtable(); in DemoteCDSToNucSeq() local
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/phy_tree/
H A Dbio_tree_conv.hpp299 typename TContainerDict::Tdata& feat_list = fd.Set(); in BioTreeConvert2Container() local
347 const typename TContainerDict::Tdata& feat_list = fd.Get(); in BioTreeConvertContainer2Dynamic() local
440 typename TContainerDict::Tdata& feat_list = fd.Set(); in BioTreeForestConvert2Container() local
486 const typename TContainerDict::Tdata& feat_list = fd.Get(); in BioTreeConvertContainer2DynamicForest() local
751 typename TContainerDict::Tdata& feat_list = fd.Set(); in BioTreeAddFeatureToDictionary() local
/dports/sysutils/burp/burp-2.4.0/src/server/
H A Dextra_comms.c105 long feat_list; member
/dports/sysutils/burp-devel/burp-2.5.4/src/server/
H A Dextra_comms.c105 long feat_list; member
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/test/objmgr/
H A Dtest_annot_ci.cpp399 TTestResult::TObjectList feat_list; in Run() local
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/phy_tree/test/
H A Dtest_biotree.cpp98 TContainerDict::Tdata& feat_list = fd.Set(); in TestBioTreeContainer() local
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/asn2fasta/
H A Dasn2fasta.cpp609 list<string> feat_list; in x_InitFeatDisplay() local
/dports/biology/ncbi-toolkit/ncbi/sequin/
H A Dsequin5.c14381 ValNodePtr feat_list; member
14928 static void RemoveNonPseudoFeatures (ValNodePtr PNTR feat_list) in RemoveNonPseudoFeatures()
15100 static ValNodePtr GetBadProteinConversionFeatures (ValNodePtr feat_list) in GetBadProteinConversionFeatures()
15282 ValNodePtr PNTR feat_list = (ValNodePtr PNTR) userdata; in CollectFeaturesToBeConverted() local
15320 ValNodePtr feat_list = NULL, sel_feat_list = NULL, vnp; in NewConvertFeaturesByList() local
15900 ValNodePtr feat_list; member
30966 ValNodePtr feat_list, in CreateBulkEditorDialogEx()
31019 ValNodePtr feat_list, in CreateBulkEditorDialog()
32464 ValNodePtr feat_list; member
32502 extern Uint1 GetSubtypeForBulkEdit (ValNodePtr feat_list) in GetSubtypeForBulkEdit()
[all …]
H A Dsequin7.c6663 extern Boolean DoBioseqFeaturesMatchSequenceConstraintX (BioseqPtr bsp, ValNodePtr feat_list, Strin… in DoBioseqFeaturesMatchSequenceConstraintX()
9908 static SeqLocPtr GetFeatureListLoc (ValNodePtr feat_list, VecScreenToolPtr vstp, BioseqPtr bsp) in GetFeatureListLoc()
10059 ValNodePtr PNTR feat_list = (ValNodePtr PNTR) userdata; in GetVectorContaminationList() local
10261 static void TrimFeatureList (ValNodePtr feat_list, VecScreenToolPtr vstp) in TrimFeatureList()
10323 static void CollectFeatureList (ValNodePtr feat_list, VecScreenToolPtr vstp, ValNodePtr PNTR loc_li… in CollectFeatureList()
11308 static void WizardGetVectorContaminationListForOneBioseq (BioseqPtr bsp, ValNodePtr PNTR feat_list) in WizardGetVectorContaminationListForOneBioseq()
14124 ValNodePtr feat_list = NULL, tmp_feat; in CombineToCreatePseudoGene() local
H A Dsequin9.c5931 static void FixProtRefPtrs (ValNodePtr feat_list) in FixProtRefPtrs()
6334 ValNodePtr PNTR feat_list) in FindProtRefPtrsOnBsp()
6360 ValNodePtr feat_list = NULL; in FindProductProtRefs() local
6375 ValNodePtr feat_list = NULL; in FindTranslExceptCDSs() local
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objtools/align_format/
H A Dshowalign.hpp582 vector<objects::SFeatInfo*> feat_list; member
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objtools/align_format/
H A Dshowalign.hpp582 vector<objects::SFeatInfo*> feat_list; member
/dports/biology/ncbi-toolkit/ncbi/desktop/
H A Dingenwin.c5031 LisT feat_list; member
6023 static void Ing_SetFeatList(LisT feat_list, Int4 index) in Ing_SetFeatList()
6746 LisT feat_list; member
7140 static void Ing_SetShowList(LisT feat_list, Int4 nList) in Ing_SetShowList()
H A Ddotvibrant.c3188 static Int4 DOT_PointCursorOnFeature(SegmenT seg, DOTSelFeatPtr feat_list, Int2 fontHt, Boolean fou… in DOT_PointCursorOnFeature()
3238 DOTSelFeatPtr feat_list=NULL; in DOT_FindFeatureInViewer() local
3277 DOTSelFeatPtr feat_list=NULL; in DOT_FindBetweenFeats() local
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/unit_test/
H A Dunit_test_feature_propagate.cpp2137 vector<CConstRef<CSeq_feat>> feat_list{ gene, mrna, cds_withoutprot, cds_withprot }; in BOOST_AUTO_TEST_CASE() local
2293 vector<CConstRef<CSeq_feat>> feat_list{ gene1, gene2, gene3, gene4, gene5 }; in BOOST_AUTO_TEST_CASE() local
/dports/ftp/bsdftpd-ssl/bsdftpd-ssl-1.1.0/ftpd/
H A Dftpd.c4955 struct feat_tab feat_list[] = { local
/dports/biology/ncbi-toolkit/ncbi/api/
H A Dsqnutil3.c7392 ValNodePtr src_list = NULL, feat_list = NULL, vnp; in CheckForSubmitText() local
12363 ValNodePtr feat_list = NULL; in FeatureListFromOverlapList() local
16388 ValNodePtr feat_list = NULL; in RNACountFeaturesBioseqCallback() local
16722 ValNodePtr feat_list = NULL; in tRNASameStrandBioseqCallback() local
18317 ValNodePtr src_list = NULL, qual_list = NULL, feat_list; in CheckBioSourceQualsEx() local
20830 ValNodePtr feat_list = NULL; in GetFeatureListForGene() local
26699 ValNodePtr feat_list = NULL; in FindOrderedLocations() local
32938 ValNodePtr src_list, qual_list, vnp, feat_list; in AddSourceQualReportInfoToGlobalDiscrepReport() local
38456 ValNodePtr feat_list = NULL; in ListFeaturesInLocation() local
38486 ValNodePtr feat_list = NULL; in ListFeaturesOverlappingLocationEx() local
[all …]
/dports/mail/alpine/alpine-465e23b/pith/
H A Dconf.c2908 static FEATURE_S feat_list[] = { in feature_list() local
/dports/editors/pico-alpine/alpine-465e23b/pith/
H A Dconf.c2908 static FEATURE_S feat_list[] = { in feature_list() local
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objmgr/util/
H A Dfeature.cpp3970 … const list< CRef< CSeq_feat > > &feat_list = old_annot.GetSeq_annotCore()->GetData().GetFtable(); in PromoteCDSToNucProtSet() local

12