| /dports/biology/bbmap/bbmap/current/template/ |
| H A D | A_SampleD.java | 157 private final FileFormat ffin1; field in A_SampleD
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| H A D | A_Sample2.java | 148 private final FileFormat ffin1; field in A_Sample2
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| H A D | A_SampleSummary.java | 145 private final FileFormat ffin1; field in A_SampleSummary
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| H A D | A_Sample_Unpaired.java | 237 private final FileFormat ffin1; field in A_Sample_Unpaired
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| H A D | A_SampleByteFile.java | 258 private final FileFormat ffin1; field in A_SampleByteFile
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| /dports/biology/bbmap/bbmap/current/clump/ |
| H A D | KmerSort1.java | 489 private final FileFormat ffin1[]; field in KmerSort1
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| H A D | StreamToOutput.java | 17 …public StreamToOutput(FileFormat ffin1, FileFormat ffin2, ConcurrentReadOutputStream[] rosa_, Kmer… in StreamToOutput()
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| H A D | KmerSort2.java | 452 private final FileFormat ffin1[]; field in KmerSort2
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| /dports/biology/bbmap/bbmap/current/driver/ |
| H A D | RenameNcbiToTid.java | 156 private final FileFormat ffin1; field in RenameNcbiToTid
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| H A D | FilterAssemblySummary.java | 176 private final FileFormat ffin1; field in FilterAssemblySummary
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| H A D | FilterLines.java | 240 private final FileFormat ffin1; field in FilterLines
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| H A D | MergeBigelow.java | 211 private final FileFormat ffin1; field in MergeBigelow
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| H A D | ParseCrossblockResults.java | 187 private final FileFormat ffin1; field in ParseCrossblockResults
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| H A D | ProcessWebcheck.java | 303 private final ArrayList<FileFormat> ffin1; field in ProcessWebcheck
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| /dports/biology/bbmap/bbmap/current/tax/ |
| H A D | IDTree.java | 196 private final FileFormat ffin1; field in IDTree
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| H A D | SplitByTaxa.java | 363 private final FileFormat ffin1; field in SplitByTaxa
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| /dports/biology/bbmap/bbmap/current/jgi/ |
| H A D | PhylipToFasta.java | 174 private final FileFormat ffin1; field in PhylipToFasta
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| H A D | Unzip.java | 250 private final FileFormat ffin1; field in Unzip
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| H A D | CutPrimers.java | 224 private final FileFormat ffin1; field in CutPrimers
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| H A D | RenameReads.java | 341 private final FileFormat ffin1; field in RenameReads
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| /dports/biology/bbmap/bbmap/current/stream/ |
| H A D | SamStreamerWrapper.java | 202 private final FileFormat ffin1; field in SamStreamerWrapper
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| /dports/biology/bbmap/bbmap/current/icecream/ |
| H A D | IceCreamGrader.java | 218 private final FileFormat ffin1; field in IceCreamGrader
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| /dports/biology/bbmap/bbmap/current/prok/ |
| H A D | FilterSilva.java | 249 private final FileFormat ffin1; field in FilterSilva
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| /dports/biology/bbmap/bbmap/current/cluster/ |
| H A D | MergeReadHeaders.java | 293 private final FileFormat ffin1; field in MergeReadHeaders
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| /dports/biology/bbmap/bbmap/current/var2/ |
| H A D | VCFFile.java | 247 private final FileFormat ffin1; field in VCFFile
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