| /dports/biology/py-bx-python/bx-python-0.8.13/lib/bx/align/ |
| H A D | score.py | 16 …def __init__(self, gap_open, gap_extend, default=-100, alphabet1="ACGT", alphabet2=None, gap1="-",… argument
125 def read_scoring_scheme(f, gap_open, gap_extend, gap1="-", gap2=None, **kwargs): argument
140 def build_scoring_scheme(s, gap_open, gap_extend, gap1="-", gap2=None, **kwargs): argument
|
| /dports/biology/star/STAR-2.7.9a/source/ |
| H A D | SoloFeature_processRecords.cpp | 32 uint64 start1, gap1; in processRecords() local
|
| /dports/devel/avr-gdb/gdb-7.3.1/gdb/testsuite/gdb.arch/ |
| H A D | i386-dr3-watch.c | 19 char gap1[32]; variable
|
| /dports/devel/gdb/gdb-11.1/gdb/testsuite/gdb.arch/ |
| H A D | i386-dr3-watch.c | 19 char gap1[32]; variable
|
| /dports/devel/gdb761/gdb-7.6.1/gdb/testsuite/gdb.arch/ |
| H A D | i386-dr3-watch.c | 19 char gap1[32]; variable
|
| /dports/biology/clustalw/clustalw-2.1/src/alignment/ |
| H A D | ObjectiveScore.cpp | 127 bool gap1, gap2; in scoreLetters() local
185 bool gap1, gap2; in scoreGaps() local
|
| /dports/science/gromacs/gromacs-2021.4/src/gromacs/linearalgebra/gmx_lapack/ |
| H A D | dlasq4.cpp | 27 double gam, gap1, gap2; in F77_FUNC() local
|
| H A D | slasq4.cpp | 27 float gam, gap1, gap2; in F77_FUNC() local
|
| /dports/devel/valgrind-lts/valgrind-dragonfly-dragonfly/coregrind/m_sigframe/ |
| H A D | sigframe-ppc32-linux.c | 105 UInt gap1[16]; member
114 UInt gap1[20]; member
|
| /dports/devel/valgrind/valgrind-dragonfly-dragonfly/coregrind/m_sigframe/ |
| H A D | sigframe-ppc32-linux.c | 105 UInt gap1[16]; member
114 UInt gap1[20]; member
|
| /dports/math/igraph/igraph-0.9.5/vendor/lapack/ |
| H A D | dlasq4.c | 180 doublereal gam, gap1, gap2; in igraphdlasq4_() local
|
| /dports/misc/visp/visp-3.4.0/3rdparty/clapack/src/ |
| H A D | dlasq4.c | 31 doublereal gam, gap1, gap2; in dlasq4_() local
|
| /dports/science/apbs/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/punc/src/lapack/ |
| H A D | slasq4.c | 26 static real gam, gap1, gap2; in slasq4_() local
|
| H A D | dlasq4.c | 27 static doublereal gam, gap1, gap2; in dlasq4_() local
|
| /dports/science/hypre/hypre-2.23.0/src/lapack/ |
| H A D | dlasq4.c | 32 static doublereal gam, gap1, gap2; in dlasq4_() local
|
| /dports/math/libflame/libflame-5.2.0/src/map/lapack2flamec/f2c/c/ |
| H A D | slasq4.c | 149 real gam, gap1, gap2; in slasq4_() local
|
| H A D | dlasq4.c | 149 doublereal gam, gap1, gap2; in dlasq4_() local
|
| /dports/science/madness/madness-ebb3fd7/src/madness/external/elemental/external/pmrrr/src/lapack/ |
| H A D | odsq4.c | 26 double gam, gap1, gap2; in odsq4() local
|
| /dports/science/ergo/ergo-3.8/source/matrix/template_lapack/lapack/ |
| H A D | template_lapack_lasq4.h | 55 Treal gam, gap1, gap2; in template_lapack_lasq4() local
|
| /dports/lang/gcc11-devel/gcc-11-20211009/gcc/testsuite/gcc.dg/vect/ |
| H A D | bb-slp-44.c | 10 unsigned long gap1; member
|
| /dports/lang/gcc11/gcc-11.2.0/gcc/testsuite/gcc.dg/vect/ |
| H A D | bb-slp-44.c | 10 unsigned long gap1; member
|
| /dports/misc/cxx_atomics_pic/gcc-11.2.0/gcc/testsuite/gcc.dg/vect/ |
| H A D | bb-slp-44.c | 10 unsigned long gap1; member
|
| /dports/lang/gcc12-devel/gcc-12-20211205/gcc/testsuite/gcc.dg/vect/ |
| H A D | bb-slp-44.c | 10 unsigned long gap1; member
|
| /dports/games/gogui/Quaqua/src/org/jdesktop/layout/ |
| H A D | AquaLayoutStyle.java | 552 Insets gap1 = getPreferredGap(component1, type, sizeStyle); in getPreferredGap() local
590 Insets gap1 = getPreferredGap(component1, type, sizeStyle); in getPreferredGap() local
|
| /dports/net/pathneck/pathneck-1.3/ |
| H A D | choke.h | 37 int gap1; /* after sanity check */ member
|