Searched defs:gapmap2 (Results 1 – 6 of 6) sorted by relevance
| /dports/biology/mafft/mafft-7.267-without-extensions/core/ |
| H A D | partSalignmm.c | 71 …tic void part_imp_match_out_vead_gapmap( double *imp, int i1, int lgth2, int start2, int *gapmap2 ) in part_imp_match_out_vead_gapmap()
272 …uble *eff2, RNApair ***grouprna1, RNApair ***grouprna2, int *gapmap1, int *gapmap2, RNApair *addit… in part_imp_rna()
672 int *gapmap1, int *gapmap2, in Atracking_localhom()
957 … *impmatch, int start1, int end1, int start2, int end2, int *gapmap1, int *gapmap2, char *sgap1, c… in partA__align()
1645 … *impmatch, int start1, int end1, int start2, int end2, int *gapmap1, int *gapmap2, char *sgap1, c… in partA__align_variousdist()
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| H A D | rna.c | 330 …ir ***grouprna1, RNApair ***grouprna2, double **impmtx, int *gapmap1, int *gapmap2, RNApair *addit…
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| H A D | tditeration.c | 258 int *gapmap1, int *gapmap2, in freelocalarrays()
378 int *gapmap1, *gapmap2; in athread() local
1292 static int *gapmap2; local
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| H A D | Falign_localhom.c | 170 int *gapmap1, int *gapmap2, in Falign_localhom()
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| H A D | Salignmm.c | 23 static void imp_match_out_vead_gapmap( double *imp, int i1, int lgth2, int *gapmap2 ) in imp_match_out_vead_gapmap()
73 …uble *eff2, RNApair ***grouprna1, RNApair ***grouprna2, int *gapmap1, int *gapmap2, RNApair *pair ) in imp_rna()
1772 … icyc, int jcyc, int alloclen, LocalHom ***localhom, double *impmatch, int *gapmap1, int *gapmap2 ) in A__align_gapmap()
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| H A D | Dalignmm.c | 113 …uble *eff2, RNApair ***grouprna1, RNApair ***grouprna2, int *gapmap1, int *gapmap2, RNApair *pair ) in imp_rnaD()
4536 … icyc, int jcyc, int alloclen, LocalHom ***localhom, double *impmatch, int *gapmap1, int *gapmap2 ) in D__align_gapmap()
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