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Searched defs:hts_idx_t (Results 1 – 11 of 11) sorted by relevance

/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/
H A Dhts.c1649 struct hts_idx_t { struct
1650 int fmt, min_shift, n_lvls, n_bins;
1651 uint32_t l_meta;
1652 int32_t n, m;
1653 uint64_t n_no_coor;
1654 bidx_t **bidx;
1655 lidx_t *lidx;
1656 uint8_t *meta; // MUST have a terminating NUL on the end
1657 int tbi_n, last_tbi_tid;
1658 struct {
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/dports/biology/py-pysam/pysam-0.18.0/htslib/
H A Dhts.c2069 struct hts_idx_t { struct
2070 int fmt, min_shift, n_lvls, n_bins;
2071 uint32_t l_meta;
2072 int32_t n, m;
2073 uint64_t n_no_coor;
2074 bidx_t **bidx;
2075 lidx_t *lidx;
2099 static void idx_dump(const hts_idx_t *idx) { in idx_dump() argument
/dports/biology/htslib/htslib-1.14/
H A Dhts.c2069 struct hts_idx_t { struct
2070 int fmt, min_shift, n_lvls, n_bins;
2071 uint32_t l_meta;
2072 int32_t n, m;
2073 uint64_t n_no_coor;
2074 bidx_t **bidx;
2075 lidx_t *lidx;
2099 static void idx_dump(const hts_idx_t *idx) { in idx_dump() argument
/dports/biology/plink/plink-ng-79b2df8c/1.9/
H A Dhts.h328 typedef struct __hts_idx_t hts_idx_t; typedef
/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/htslib/
H A Dhts.h510 typedef struct __hts_idx_t hts_idx_t; typedef
/dports/biology/vt/vt-0.57721/lib/htslib/htslib/
H A Dhts.h513 typedef struct __hts_idx_t hts_idx_t; typedef
/dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/htslib/
H A Dhts.h525 typedef struct __hts_idx_t hts_idx_t; typedef
/dports/biology/stacks/stacks-2.4/htslib/htslib/
H A Dhts.h511 typedef struct __hts_idx_t hts_idx_t; typedef
/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/htslib/
H A Dhts.h226 typedef struct hts_idx_t hts_idx_t; typedef
/dports/biology/py-pysam/pysam-0.18.0/htslib/htslib/
H A Dhts.h228 typedef struct hts_idx_t hts_idx_t; typedef
/dports/biology/htslib/htslib-1.14/htslib/
H A Dhts.h228 typedef struct hts_idx_t hts_idx_t; typedef