Searched defs:indelSeq (Results 1 – 3 of 3) sorted by relevance
392 bool GlfRecord::setInsertionIndel1(const std::string& indelSeq) in setInsertionIndel1()399 bool GlfRecord::setDeletionIndel1(const std::string& indelSeq) in setDeletionIndel1()406 bool GlfRecord::setInsertionIndel2(const std::string& indelSeq) in setInsertionIndel2()413 bool GlfRecord::setDeletionIndel2(const std::string& indelSeq) in setDeletionIndel2()453 int16_t GlfRecord::getIndel1(std::string& indelSeq) in getIndel1()465 int16_t GlfRecord::getIndel2(std::string& indelSeq) in getIndel2()
369 std::string indelSeq = ""; in writeSec1Record2() local501 std::string indelSeq; in readSec1Record2() local
472 seqan::CharString const & seq, seqan::CharString const & indelSeq) in simulateSVIndel()501 seqan::CharString indelSeq; in simulateSVIndel() local742 seqan::CharString indelSeq; in simulateSmallIndel() local