Searched defs:infixV (Results 1 – 4 of 4) sorted by relevance
| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/seeds/ |
| H A D | banded_chain_alignment_impl.h | 855 TInfixV infixV; in _initializeBandedChain() local
1001 TInfixV infixV = infix(seqV, gridBegin.i2, gridEnd.i2); in _computeGapArea() local
1059 TInfixV infixV = infix(seqV, gridBegin.i2, gridEnd.i2); in _computeAnchorArea() local
1141 TInfixV infixV = infix(seqV, gridBegin.i2, gridEnd.i2); in _finishBandedChain() local
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| /dports/biology/seqan/seqan-library-2.4.0/include/seqan/seeds/ |
| H A D | banded_chain_alignment_impl.h | 855 TInfixV infixV; in _initializeBandedChain() local
1001 TInfixV infixV = infix(seqV, gridBegin.i2, gridEnd.i2); in _computeGapArea() local
1059 TInfixV infixV = infix(seqV, gridBegin.i2, gridEnd.i2); in _computeAnchorArea() local
1141 TInfixV infixV = infix(seqV, gridBegin.i2, gridEnd.i2); in _finishBandedChain() local
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| /dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/seeds/ |
| H A D | banded_chain_alignment_impl.h | 767 TInfixV infixV; in _initializeBandedChain() local
909 TInfixV infixV = infix(seqV, gridBegin.i2, gridEnd.i2); in _computeGapArea() local
966 TInfixV infixV = infix(seqV, gridBegin.i2, gridEnd.i2); in _computeAnchorArea() local
1047 TInfixV infixV = infix(seqV, gridBegin.i2, gridEnd.i2); in _finishBandedChain() local
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/stellar/ |
| H A D | stellar_extension.h | 851 …typename Infix<TSequence>::Type infixV = infix(host(infV), beginPosition(infV), endPosition(infV)); in _extendAndExtract() local
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