| /dports/biology/mafft/mafft-7.267-without-extensions/core/ |
| H A D | SAalignmm.c | 6 …uble **cpmx1, double **cpmx2, int i1, int lgth2, double **doublework, int **intwork, int initializ… in match_calc()
182 static TLS int **intwork; in Aalign() local
|
| H A D | MSalignmm.c | 16 …uble **cpmx1, double **cpmx2, int i1, int lgth2, double **doublework, int **intwork, int initializ… in match_calc_add()
95 …uble **cpmx1, double **cpmx2, int i1, int lgth2, double **doublework, int **intwork, int initializ… in match_calc()
348 int **intwork; in MSalignmm_tanni() local
589 double **doublework, int **intwork in freearrays_rec1()
665 int **intwork; in MSalignmm_rec() local
1953 int ***intwork; in MSalignmm_tanni_variousdist() local
2209 double ***doublework, int ***intwork in freearrays_rec1_variousdist()
2273 int ***intwork; in MSalignmm_rec_variousdist() local
|
| H A D | Lalignmm.c | 18 …uble **cpmx1, double **cpmx2, int i1, int lgth2, double **doublework, int **intwork, int initializ… in match_ribosum()
94 …uble **cpmx1, double **cpmx2, int i1, int lgth2, double **doublework, int **intwork, int initializ… in match_calc()
374 int **intwork; in MSalign2m2m_rec() local
1274 int **intwork; in MSalignmm_rec() local
|
| H A D | Galign11.c | 201 static TLS int **intwork = NULL; in G__align11() local
712 static TLS int **intwork; in G__align11_noalign() local
|
| H A D | Salignmm.c | 500 …2, char **seq2, double *eff2, int i1, int lgth2, double **doublework, int **intwork, int initializ… in match_calc_slow()
544 …uble **cpmx1, double **cpmx2, int i1, int lgth2, double **doublework, int **intwork, int initializ… in match_calc_add()
642 …uble **cpmx1, double **cpmx2, int i1, int lgth2, double **doublework, int **intwork, int initializ… in match_calc()
1052 static TLS int **intwork; in A__align() local
1819 static TLS int ***intwork; in A__align_variousdist() local
|
| H A D | partSalignmm.c | 431 …uble **cpmx1, double **cpmx2, int i1, int lgth2, double **doublework, int **intwork, int initializ… in match_calc()
568 …uble **cpmx1, double **cpmx2, int i1, int lgth2, double **doublework, int **intwork, int initializ… in match_calc_add()
992 static TLS int **intwork; in partA__align() local
1680 static TLS int ***intwork; in partA__align_variousdist() local
|
| H A D | genalign11.c | 146 static TLS int **intwork; in genL__align11() local
|
| H A D | MSalign11.c | 320 static int **intwork; in MSalign11() local
|
| H A D | suboptalign11.c | 162 static int **intwork; in suboptalign11() local
|
| H A D | Dalignmm.c | 390 …2, char **seq2, double *eff2, int i1, int lgth2, double **doublework, int **intwork, int initializ… in match_calc_slow()
435 …uble **cpmx1, double **cpmx2, int i1, int lgth2, double **doublework, int **intwork, int initializ… in match_calc_add()
534 …uble **cpmx1, double **cpmx2, int i1, int lgth2, double **doublework, int **intwork, int initializ… in match_calc()
2742 static TLS int **intwork; in D__align() local
4578 static TLS int ***intwork; in D__align_variousdist() local
|