/dports/biology/bwa/bwa-0.7.17/ |
H A D | bwaseqio.c | 96 int n_seqs, l, i; in bwa_read_bam() local 155 int n_seqs, l, i, is_comp = mode&BWA_MODE_COMPREAD, is_64 = mode&BWA_MODE_IL13, l_bc = mode>>24; in bwa_read_seq() local 223 void bwa_free_read_seq(int n_seqs, bwa_seq_t *seqs) in bwa_free_read_seq()
|
H A D | bwtaln.c | 83 void bwa_cal_sa_reg_gap(int tid, bwt_t *const bwt, int n_seqs, bwa_seq_t *seqs, const gap_opt_t *op… in bwa_cal_sa_reg_gap() 132 int n_seqs; member 161 int i, n_seqs; in bwa_aln_core() local
|
H A D | bwape.c | 81 static int infer_isize(int n_seqs, bwa_seq_t *seqs[2], isize_info_t *ii, double ap_prior, int64_t L) in infer_isize() 260 int bwa_cal_pac_pos_pe(const bntseq_t *bns, const char *prefix, bwt_t *const _bwt, int n_seqs, bwa_… in bwa_cal_pac_pos_pe() 496 ubyte_t *bwa_paired_sw(const bntseq_t *bns, const ubyte_t *_pacseq, int n_seqs, bwa_seq_t *seqs[2],… in bwa_paired_sw() 627 int i, j, n_seqs; in bwa_sai2sam_pe_core() local
|
H A D | bwase.c | 144 void bwa_cal_pac_pos(const bntseq_t *bns, const char *prefix, int n_seqs, bwa_seq_t *seqs, int max_… in bwa_cal_pac_pos() 287 void bwa_refine_gapped(const bntseq_t *bns, int n_seqs, bwa_seq_t *seqs, ubyte_t *_pacseq) in bwa_refine_gapped() 510 int i, n_seqs, m_aln; in bwa_sai2sam_se_core() local
|
H A D | bntseq.h | 58 int32_t n_seqs; member
|
H A D | fastmap.c | 34 int n_seqs; member
|
H A D | bntseq.c | 141 int32_t n_seqs; in bns_restore_core() local
|
/dports/textproc/ibus/ibus-1.5.24/src/ |
H A D | ibuscomposetable.h | 42 gint n_seqs; member 51 gint n_seqs; member
|
H A D | ibuscomposetable.c | 539 guint16 n_seqs; in ibus_compose_table_serialize() local 669 guint16 n_seqs = 0; in ibus_compose_table_deserialize() local 1058 gint n_seqs) in ibus_compose_table_list_add_array()
|
H A D | ibusenginesimple.c | 643 int n_seqs; in check_table() local 1732 gint n_seqs) in ibus_engine_simple_add_table()
|
/dports/math/gecode/gecode-0916a1a/gecode/int/ |
H A D | ldsb.hh | 233 unsigned int n_seqs; member in Gecode::Int::LDSB::VariableSequenceSymmetryImp 275 unsigned int n_seqs; member in Gecode::Int::LDSB::ValueSequenceSymmetryImp
|
/dports/x11-toolkits/gtk30/gtk+-3.24.31/gtk/ |
H A D | gtkcomposetable.h | 34 int n_seqs; member
|
H A D | gtkcomposetable.c | 513 guint16 n_seqs = compose_table->n_seqs; in gtk_compose_table_serialize() local 578 guint16 n_seqs; in gtk_compose_table_load_cache() local 817 int n_seqs) in gtk_compose_table_list_add_array()
|
H A D | gtkimcontextsimple.c | 1186 int n_seqs) in gtk_im_context_simple_add_table()
|
/dports/biology/freebayes/freebayes-1.3.5/contrib/SeqLib/bwa/ |
H A D | bntseq.h | 58 int32_t n_seqs; member
|
/dports/biology/hhsuite/hh-suite-3.3.0/src/ |
H A D | hhhmm.h | 29 int n_seqs; // number of sequences read in (INCLUDING >ss_ and >cf_ sequences) variable
|
/dports/biology/clustal-omega/clustal-omega-1.2.4/src/hhalign/ |
H A D | hhhmm.h | 32 int n_seqs; // number of sequences read in (INCLUDING >ss_ and >cf_ sequences) variable
|
/dports/x11-toolkits/gtk20/gtk+-2.24.33/gtk/ |
H A D | gtkimcontextsimple.c | 45 gint n_seqs; member 1227 gint n_seqs) in gtk_im_context_simple_add_table()
|
/dports/biology/bfc/bfc-69ab176e/ |
H A D | count.c | 37 int n_seqs; member
|
/dports/biology/diamond/diamond-2.0.13/src/data/ |
H A D | sequence_file.h | 40 size_t n_seqs; member
|
/dports/x11-toolkits/gtk40/gtk-4.4.1/gtk/ |
H A D | gtkimcontextsimple.c | 245 int n_seqs) in add_compose_table_from_data() 1300 int n_seqs) in gtk_im_context_simple_add_table()
|
H A D | gtkcomposetable.c | 635 int n_seqs) in gtk_compose_table_data_hash() 1184 int n_seqs) in gtk_compose_table_new_with_data()
|
/dports/biology/diamond/diamond-2.0.13/src/data/dmnd/ |
H A D | dmnd.cpp | 243 …en, uint64_t &offset, vector<SeqInfo> &pos_array, OutputFile &out, size_t &letters, size_t &n_seqs) in push_seq() 283 size_t letters = 0, n = 0, n_seqs = 0, total_seqs = 0; in make_db() local
|
/dports/biology/trimadap/trimadap-0.1-3-gddfef21/ |
H A D | trimadap-mt.c | 235 int n_seqs; member
|
/dports/biology/seqtk/seqtk-1.3/ |
H A D | seqtk.c | 1028 uint64_t i, num = 0, n_seqs = 0; in stk_sample() local 1184 int64_t n_seqs = 0; in stk_seq() local
|