nt_loc (definition) in projects: dports

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Searched defs:nt_loc (Results 1 – 2 of 2) sorted by relevance

/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/hgvs/
H A D	semantic_actions.cpp	420 void s_SetSequenceInfo(CRef<CNtLocation>& nt_loc, const string& identifier, const EVariantSeqType& … in s_SetSequenceInfo() 502 void AssignNtSSR(CRef<CNtLocation> nt_loc, CRef<CCount> count, CRef<CSimpleVariant>& result) in AssignNtSSR() 534 void AssignNtInv(CRef<CNtLocation> nt_loc, CRef<CSimpleVariant>& result) in AssignNtInv() 541 void AssignNtInvSize(CRef<CNtLocation> nt_loc, string size, CRef<CSimpleVariant>& result) in AssignNtInvSize() 548 void AssignNtConversion(CRef<CNtLocation> nt_loc, CRef<CNtLocation> origin, CRef<CSimpleVariant>& r… in AssignNtConversion() 569 void AssignNtDeletion(CRef<CNtLocation> nt_loc, CRef<CSimpleVariant>& result) in AssignNtDeletion() 598 void AssignNtDelins(CRef<CNtLocation> nt_loc, in AssignNtDelins() 612 void AssignNtDup(CRef<CNtLocation> nt_loc, CRef<CSimpleVariant>& result) in AssignNtDup() 630 void AssignNtSub(CRef<CNtLocation> nt_loc, in AssignNtSub() 642 void AssignNtIdentity(CRef<CNtLocation> nt_loc, in AssignNtIdentity() [all …]
H A D	na_irep_to_seqfeat.cpp	53 CRef<CVariation_ref> CHgvsNaIrepReader::x_CreateNaIdentityVarref(const CNtLocation& nt_loc, in x_CreateNaIdentityVarref() 70 CRef<CVariation_ref> CHgvsNaIrepReader::x_CreateSubstVarref(const CNtLocation& nt_loc, in x_CreateSubstVarref() 130 const auto& nt_loc = sub.GetLoc(); in x_CreateSubstVarref() local 146 const auto& nt_loc = del.GetLoc().GetNtloc(); in x_CreateDeletionVarref() local 217 const auto& nt_loc = delins.GetLoc().GetNtloc(); in x_CreateDelinsVarref() local 265 CRef<CVariation_ref> CHgvsNaIrepReader::x_CreateDelinsVarref(const CNtLocation& nt_loc, in x_CreateDelinsVarref() 300 const auto& nt_loc = dup.GetLoc().GetNtloc(); in x_CreateDuplicationVarref() local 387 const auto& nt_loc = conv.GetLoc(); in x_CreateConversionVarref() local 431 const auto& nt_loc = ssr.GetLoc().GetNtloc(); in x_CreateSSRVarref() local 677 const CNtLocation& nt_loc, in CreateSeqloc() [all …]