/dports/science/cdk/cdk-cdk-2.3/tool/pcore/src/test/java/org/openscience/cdk/pharmacophore/ |
H A D | PharmacophoreAtomTest.java | 33 PharmacophoreAtom patom = new PharmacophoreAtom("[CX2]N", "Amine", new Point3d(0, 0, 0)); in testGetterSetter() local 42 PharmacophoreAtom patom = new PharmacophoreAtom("[CX2]N", "Amine", new Point3d(0, 0, 0)); in testMatchingAtoms() local
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/dports/science/openbabel/openbabel-3.1.1/src/formats/json/ |
H A D | pubchemjsonformat.cpp | 186 OBAtom *patom = pmol->NewAtom(eAids[i].GetUint()); in ReadMolecule() local 195 OBAtom *patom = pmol->NewAtom(eAids[i].GetUint()); in ReadMolecule() local 214 OBAtom *patom = pmol->GetAtomById(charge["aid"].GetUint()); in ReadMolecule() local 233 OBAtom *patom = pmol->GetAtomById(radical["aid"].GetUint()); in ReadMolecule() local 245 OBAtom *patom = pmol->GetAtomById(radical["aid"].GetUint()); in ReadMolecule() local 284 OBAtom *patom = pmol->GetAtomById(isotope["aid"].GetUint()); in ReadMolecule() local 399 OBAtom *patom = pmol->GetAtomById(cAids[i].GetUint()); in ReadMolecule() local
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H A D | chemdoodlejsonformat.cpp | 150 OBAtom *patom = pmol->NewAtom(); in ReadMolecule() local
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/dports/science/openbabel/openbabel-3.1.1/src/fingerprints/ |
H A D | finger2.cpp | 112 OBAtom *patom; in GetFingerprint() local 147 int level, OBAtom* patom, OBBond* pbond) in getFragments()
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/dports/science/cdk/cdk-cdk-2.3/tool/pcore/src/main/java/org/openscience/cdk/pharmacophore/ |
H A D | PharmacophoreQueryAtom.java | 117 PharmacophoreAtom patom = PharmacophoreAtom.get(atom); in matches() local
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H A D | PharmacophoreMatcher.java | 218 PharmacophoreAtom patom = PharmacophoreAtom.get(iAtom); in matches() local 488 PharmacophoreAtom patom = new PharmacophoreAtom(smarts, qatom.getSymbol(), coords); in newPCoreAtom() local
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/dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/ptools/src/ |
H A D | PToolsAligner.cpp | 66 PTools::Atom patom(pproperty, pcoord); in createRigidBody() local
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/dports/science/openbabel/openbabel-3.1.1/src/formats/xml/ |
H A D | cdxmlformat.cpp | 310 OBAtom *patom; in CalculateMoleculeBoundary() local 412 OBAtom *patom; in WriteMolecule() local
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/dports/net/tightvnc/vnc_unixsrc/Xvnc/programs/Xserver/dix/ |
H A D | atom.c | 176 FreeAtom(patom) in FreeAtom() argument
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/dports/net/tigervnc-server/tigervnc-1.12.0/unix/xserver/dix/ |
H A D | atom.c | 168 FreeAtom(NodePtr patom) in FreeAtom()
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/dports/x11-servers/xephyr/xorg-server-1.20.13/dix/ |
H A D | atom.c | 168 FreeAtom(NodePtr patom) in FreeAtom()
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/dports/x11-servers/xorg-vfbserver/xorg-server-1.20.13/dix/ |
H A D | atom.c | 168 FreeAtom(NodePtr patom) in FreeAtom()
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/dports/x11-servers/xwayland-devel/xorg-xserver-xorg-server-21.0.99.1-177-g9e5a37961/dix/ |
H A D | atom.c | 168 FreeAtom(NodePtr patom) in FreeAtom()
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/dports/x11-servers/xwayland/xorg-server-1.20.13/dix/ |
H A D | atom.c | 168 FreeAtom(NodePtr patom) in FreeAtom()
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/dports/x11-servers/xorg-dmx/xorg-server-1.20.13/dix/ |
H A D | atom.c | 168 FreeAtom(NodePtr patom) in FreeAtom()
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/dports/x11-servers/xorg-nestserver/xorg-server-1.20.13/dix/ |
H A D | atom.c | 168 FreeAtom(NodePtr patom) in FreeAtom()
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/dports/x11-servers/xarcan/xarcan-0.6.0/dix/ |
H A D | atom.c | 168 FreeAtom(NodePtr patom) in FreeAtom()
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/dports/x11-servers/xorg-server/xorg-server-1.20.13/dix/ |
H A D | atom.c | 168 FreeAtom(NodePtr patom) in FreeAtom()
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/dports/x11-wm/chamfer/chamferwm-d0916ee/src/ |
H A D | backend.cpp | 869 xcb_atom_t *patom = (xcb_atom_t*)xcb_get_property_value(propertyReplyWindowType); in HandleEvent() local 878 xcb_atom_t *patom = (xcb_atom_t*)xcb_get_property_value(propertyReplyWindowState); in HandleEvent() local 991 xcb_atom_t *patom = (xcb_atom_t*)xcb_get_property_value(propertyReplyWindowType); in HandleEvent() local 999 xcb_atom_t *patom = (xcb_atom_t*)xcb_get_property_value(propertyReplyWindowState); in HandleEvent() local 1050 xcb_atom_t *patom = (xcb_atom_t*)xcb_get_property_value(propertyReplyWindowType); in HandleEvent() local 1070 xcb_atom_t *patom = (xcb_atom_t*)xcb_get_property_value(propertyReplyWindowState); in HandleEvent() local
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/dports/x11-fonts/xfs/xfs-1.2.0/difs/ |
H A D | atom.c | 170 free_atom(NodePtr patom) in free_atom()
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/dports/graphics/azpainterb/azpainterb-1.1.3/mlib/src/x11/ |
H A D | x11_event_sub.c | 114 Atom *patom; in mX11Event_change_NET_WM_STATE() local
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/dports/graphics/azpainter/azpainter-2.1.7/mlib/src/x11/ |
H A D | x11_event_sub.c | 114 Atom *patom; in mX11Event_change_NET_WM_STATE() local
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/dports/science/rdkit/rdkit-Release_2021_03_5/Code/GraphMol/MolStandardize/ |
H A D | Charge.cpp | 128 Atom *patom = omol->getAtomWithIdx(poccur.back()); in reionize() local 183 Atom *patom = omol->getAtomWithIdx(poccur.back()); in reionize() local
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/dports/science/openbabel/openbabel-3.1.1/src/formats/ |
H A D | inchiformat.cpp | 141 OBAtom* patom = pmol->GetAtom(i+1); //index starts at 1 in ReadMolecule() local 327 OBAtom* patom; in WriteMolecule() local
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H A D | cofformat.cpp | 239 OBAtom* patom; in ReadMolecule() local
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