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Searched defs:qEndPos (Results 1 – 7 of 7) sorted by relevance

/dports/biology/mmseqs2/MMseqs2-13-45111/src/util/
H A Dsummarizealis.cpp61 int qEndPos = std::max(res.qStartPos, res.qEndPos); in summarizealis() local
H A Dresult2dnamsa.cpp127 int qEndPos = std::max(res.qStartPos, res.qEndPos); in result2dnamsa() local
H A Doffsetalignment.cpp27 int qEndPos = std::max(results[resIdx].qStartPos, results[resIdx].qEndPos); in chainAlignmentHits() local
138 int qEndPos = isNucleotideSearch ? res.qEndPos : res.qEndPos * 3; in updateOffset() local
/dports/biology/mmseqs2/MMseqs2-13-45111/src/alignment/
H A DMatcher.h41 int qEndPos; member
H A DStripedSmithWaterman.h51 short qEndPos; member
H A Drescorediagonal.cpp254 int qStartPos, qEndPos, dbStartPos, dbEndPos; in doRescorediagonal() local
H A DMatcher.cpp140 const unsigned int qEndPos = alignment.qEndPos1; in getSWResult() local