| /dports/biology/fastp/fastp-0.23.2/src/ |
| H A D | filter.cpp | 27 const char* qualstr = r->mQuality->c_str(); in passFilter() local
109 const char* qualstr = r->mQuality->c_str(); in trimAndCut() local
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| H A D | stats.cpp | 234 const char* qualstr = r->mQuality->c_str(); in statRead() local
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| /dports/biology/freebayes/freebayes-1.3.5/src/ |
| H A D | Utility.cpp | 88 long double jointQuality(const std::string& qualstr) { in jointQuality()
101 std::vector<short> qualities(const std::string& qualstr) { in qualities()
111 long double sumQuality(const std::string& qualstr) { in sumQuality()
118 long double minQuality(const std::string& qualstr) { in minQuality()
140 long double averageQuality(const std::string& qualstr) { in averageQuality()
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| H A D | AlleleParser.cpp | 1183 string& qualstr in makeAllele()
1468 string qualstr = rQual.substr(rp - length, length); in registerAlignment() local
1508 string qualstr = rQual.substr(rp - length, length); in registerAlignment() local
1558 string qualstr = rQual.substr(rp - length, length); in registerAlignment() local
1601 string qualstr = rQual.substr(rp - length, length); in registerAlignment() local
1649 string qualstr = rQual.substr(spanstart, L); in registerAlignment() local
1724 string qualstr = rQual.substr(spanstart, L); in registerAlignment() local
1746 string qualstr = rQual.substr(rp, l); in registerAlignment() local
1771 string qualstr = rQual.substr(rp, l); in registerAlignment() local
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| /dports/net/libvncserver/libvncserver-LibVNCServer-0.9.13/test/ |
| H A D | tjbench.c | 82 char tempstr[1024], sizestr[20]="\0", qualstr[6]="\0", *ptr; in decomptest() local
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| /dports/www/chromium-legacy/chromium-88.0.4324.182/third_party/angle/third_party/glmark2/src/src/libjpeg-turbo/ |
| H A D | tjbench.c | 108 char tempstr[1024], sizestr[20]="\0", qualstr[6]="\0", *ptr; in decomp() local
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| /dports/benchmarks/glmark2/glmark2-2021.12/src/libjpeg-turbo/ |
| H A D | tjbench.c | 108 char tempstr[1024], sizestr[20]="\0", qualstr[6]="\0", *ptr; in decomp() local
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| /dports/biology/emboss/EMBOSS-6.6.0/ajax/core/ |
| H A D | ajassemwrite.c | 1381 AjPStr qualstr = NULL; in assemoutWriteSamAlignment() local
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| H A D | ajassemread.c | 1483 AjPStr qualstr = NULL; in asseminBamAlignmentRec2Emboss() local
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| H A D | ajseqwrite.c | 7133 AjPStr qualstr = NULL; in seqWriteBam() local
7302 AjPStr qualstr = NULL; in seqWriteSam() local
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| H A D | ajseqread.c | 10126 AjPStr qualstr = NULL; in seqReadBam() local
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| /dports/multimedia/avidemux-cli/avidemux_2.7.6/avidemux_plugins/ADM_scriptEngines/spiderMonkey/src/smjs/ |
| H A D | jsxml.c | 498 JSString *str, *qualstr; in qname_toString() local
|
| /dports/multimedia/avidemux-qt5/avidemux_2.7.6/avidemux_plugins/ADM_scriptEngines/spiderMonkey/src/smjs/ |
| H A D | jsxml.c | 498 JSString *str, *qualstr; in qname_toString() local
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| /dports/lang/spidermonkey17/js/src/ |
| H A D | jsxml.c | 498 JSString *str, *qualstr; in qname_toString() local
|
| /dports/multimedia/avidemux-plugins/avidemux_2.7.6/avidemux_plugins/ADM_scriptEngines/spiderMonkey/src/smjs/ |
| H A D | jsxml.c | 498 JSString *str, *qualstr; in qname_toString() local
|
| /dports/multimedia/avidemux/avidemux_2.7.6/avidemux_plugins/ADM_scriptEngines/spiderMonkey/src/smjs/ |
| H A D | jsxml.c | 498 JSString *str, *qualstr; in qname_toString() local
|