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Searched defs:query_gapped_start (Results 1 – 12 of 12) sorted by relevance

/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/unit_tests/api/
H A Dredoalignment_unit_test.cpp463 const int query_gapped_start[k_num_hsps_start] = { 431, 186, 480}; in BOOST_FIXTURE_TEST_SUITE() local
523 const int query_gapped_start[k_num_hsps_start] = { 431, 186, 480}; in BOOST_AUTO_TEST_CASE() local
581 const int query_gapped_start[k_num_hsps_start] = in BOOST_AUTO_TEST_CASE() local
655 const int query_gapped_start[k_num_hsps_start] = in BOOST_AUTO_TEST_CASE() local
720 const int query_gapped_start[k_num_hsps_start] = { 431, 186, 480 }; in BOOST_AUTO_TEST_CASE() local
776 const int query_gapped_start[k_num_hsps_start] = { 431, 186, 480}; in BOOST_AUTO_TEST_CASE() local
837 const int query_gapped_start[k_num_hsps_start] = in BOOST_AUTO_TEST_CASE() local
915 const int query_gapped_start[k_num_hsps_start] = { 1233, 1017, 1310, in BOOST_AUTO_TEST_CASE() local
H A Dtraceback_unit_test.cpp259 …const int query_gapped_start[k_num_hsps_start] = { 20, 6035, 6625, 6745, 5295, 5199, 7193, 3819, 7… in BOOST_AUTO_TEST_CASE() local
395 const int query_gapped_start[k_num_hsps_start] = { 26671, 13986, 23372}; in BOOST_AUTO_TEST_CASE() local
525 …const int query_gapped_start[k_num_hsps_start] = { 47, 4181, 3286, 2034, 2228, 871, 632, 1798, 138… in BOOST_AUTO_TEST_CASE() local
659 const int query_gapped_start[k_num_hsps_start] = { 173, 611, 662, 319, 254, 719, 72, in BOOST_AUTO_TEST_CASE() local
895 …const int query_gapped_start[k_num_hsps_start] = { 47, 4181, 3286, 2034, 2228, 871, 632, 1798, 138… in BOOST_AUTO_TEST_CASE() local
1000 …const int query_gapped_start[k_num_hsps_start] = { 20, 6035, 6625, 6745, 5295, 5199, 7193, 3819, 7… in BOOST_AUTO_TEST_CASE() local
H A Dtracebacksearch_unit_test.cpp120 const int query_gapped_start[k_num_hsps_start] = in x_GetSampleHspStream() local
194 const int query_gapped_start[k_num_hsps_start] = { 0 }; in x_GetSelfHitHspStream() local
H A Drmblast_traceback_unit_test.cpp256 const int query_gapped_start[k_num_hsps_start] = { 6625, 6035, 5298, 7194, 7411, 5202, 3821 }; in BOOST_FIXTURE_TEST_SUITE() local
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/unit_tests/api/
H A Dredoalignment_unit_test.cpp463 const int query_gapped_start[k_num_hsps_start] = { 431, 186, 480}; in BOOST_FIXTURE_TEST_SUITE() local
523 const int query_gapped_start[k_num_hsps_start] = { 431, 186, 480}; in BOOST_AUTO_TEST_CASE() local
581 const int query_gapped_start[k_num_hsps_start] = in BOOST_AUTO_TEST_CASE() local
655 const int query_gapped_start[k_num_hsps_start] = in BOOST_AUTO_TEST_CASE() local
720 const int query_gapped_start[k_num_hsps_start] = { 431, 186, 480 }; in BOOST_AUTO_TEST_CASE() local
776 const int query_gapped_start[k_num_hsps_start] = { 431, 186, 480}; in BOOST_AUTO_TEST_CASE() local
837 const int query_gapped_start[k_num_hsps_start] = in BOOST_AUTO_TEST_CASE() local
915 const int query_gapped_start[k_num_hsps_start] = { 1233, 1017, 1310, in BOOST_AUTO_TEST_CASE() local
H A Dtraceback_unit_test.cpp259 …const int query_gapped_start[k_num_hsps_start] = { 20, 6035, 6625, 6745, 5295, 5199, 7193, 3819, 7… in BOOST_AUTO_TEST_CASE() local
395 const int query_gapped_start[k_num_hsps_start] = { 26671, 13986, 23372}; in BOOST_AUTO_TEST_CASE() local
525 …const int query_gapped_start[k_num_hsps_start] = { 47, 4181, 3286, 2034, 2228, 871, 632, 1798, 138… in BOOST_AUTO_TEST_CASE() local
659 const int query_gapped_start[k_num_hsps_start] = { 173, 611, 662, 319, 254, 719, 72, in BOOST_AUTO_TEST_CASE() local
895 …const int query_gapped_start[k_num_hsps_start] = { 47, 4181, 3286, 2034, 2228, 871, 632, 1798, 138… in BOOST_AUTO_TEST_CASE() local
1000 …const int query_gapped_start[k_num_hsps_start] = { 20, 6035, 6625, 6745, 5295, 5199, 7193, 3819, 7… in BOOST_AUTO_TEST_CASE() local
H A Dtracebacksearch_unit_test.cpp120 const int query_gapped_start[k_num_hsps_start] = in x_GetSampleHspStream() local
194 const int query_gapped_start[k_num_hsps_start] = { 0 }; in x_GetSelfHitHspStream() local
H A Drmblast_traceback_unit_test.cpp256 const int query_gapped_start[k_num_hsps_start] = { 6625, 6035, 5298, 7194, 7411, 5202, 3821 }; in BOOST_FIXTURE_TEST_SUITE() local
/dports/biology/ncbi-toolkit/ncbi/algo/blast/core/
H A Dblast_hits.c127 Int4 subject_end, Int4 query_gapped_start, in Blast_HSPInit()
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/core/
H A Dblast_hits.c152 Int4 subject_end, Int4 query_gapped_start, in Blast_HSPInit()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/core/
H A Dblast_hits.c152 Int4 subject_end, Int4 query_gapped_start, in Blast_HSPInit()
/dports/biology/ncbi-toolkit/ncbi/tools/
H A Dblastdef.h1629 Int4 query_gapped_start, member