| /dports/biology/py-ete3/ete3-3.1.2/ete3/parser/ |
| H A D | fasta.py | 48 def read_fasta(source, obj=None, header_delimiter="\t", fix_duplicates=True): function
|
| /dports/biology/abyss/abyss-2.3.1/Graph/ |
| H A D | FastaIO.h | 15 std::istream& read_fasta(std::istream& in, Graph& g) in read_fasta() function
|
| /dports/biology/hhsuite/hh-suite-3.3.0/scripts/ |
| H A D | pdbfilter.py | 33 def read_fasta(fasta_file): function
|
| /dports/biology/tRNAscan-SE/tRNAscan-SE-2.0/lib/tRNAscanSE/ |
| H A D | Sequence.pm | 226 sub read_fasta subroutine
|
| /dports/biology/stringtie/stringtie-2.1.1/SuperReads_RNA/global-1/jellyfish/include/jellyfish/ |
| H A D | whole_sequence_parser.hpp | 113 void read_fasta(stream_status& st, sequence_list& buff) { in read_fasta() function in jellyfish::whole_sequence_parser
|
| H A D | mer_overlap_sequence_parser.hpp | 155 void read_fasta(stream_status& st, sequence_ptr& buff) { in read_fasta() function in jellyfish::mer_overlap_sequence_parser
|
| /dports/biology/mummer/mummer-4.0.0beta2-2-g277dac5/tests/ |
| H A D | check_cigar.cc | 9 name_seq_map read_fasta(const char* path) { in read_fasta() function
|
| /dports/biology/jellyfish/jellyfish-2.3.0/include/jellyfish/ |
| H A D | whole_sequence_parser.hpp | 134 void read_fasta(stream_status& st, sequence_list& buff) { in read_fasta() function in jellyfish::whole_sequence_parser
|
| H A D | mer_overlap_sequence_parser.hpp | 161 void read_fasta(stream_status& st, sequence_ptr& buff) { in read_fasta() function in jellyfish::mer_overlap_sequence_parser
|
| /dports/biology/mummer/mummer-4.0.0beta2-2-g277dac5/include/jellyfish/ |
| H A D | whole_sequence_parser.hpp | 121 void read_fasta(stream_status& st, sequence_list& buff) { in read_fasta() function in jellyfish::whole_sequence_parser
|
| /dports/biology/abyss/abyss-2.3.1/dialign/ |
| H A D | io.c | 395 struct seq_col* read_fasta(char *filename) { in read_fasta() function
|