| /dports/biology/bowtie2/bowtie2-2.4.4/ |
| H A D | dp_framer.cpp | 84 int64_t reflen, // length of reference sequence aligned to in frameSeedExtensionRect()
183 int64_t reflen, // length of reference sequence aligned to in frameFindMateAnchorLeftRect()
297 int64_t reflen, // length of reference sequence aligned to in frameFindMateAnchorRightRect()
371 size_t reflen, in testCaseFindMateAnchorLeft()
431 size_t reflen, in testCaseFindMateAnchorRight()
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| H A D | dp_framer.h | 162 int64_t reflen, // length of reference sequence aligned to in frameFindMateRect()
247 size_t reflen, // in: length of reference sequence aligned to in trimToRef()
|
| /dports/biology/hisat2/hisat2-2.2.1/ |
| H A D | dp_framer.cpp | 85 int64_t reflen, // length of reference sequence aligned to in frameSeedExtensionRect()
184 int64_t reflen, // length of reference sequence aligned to in frameFindMateAnchorLeftRect()
298 int64_t reflen, // length of reference sequence aligned to in frameFindMateAnchorRightRect()
372 size_t reflen, in testCaseFindMateAnchorLeft()
432 size_t reflen, in testCaseFindMateAnchorRight()
|
| H A D | dp_framer.h | 157 int64_t reflen, // length of reference sequence aligned to in frameFindMateRect()
242 size_t reflen, // in: length of reference sequence aligned to in trimToRef()
|
| /dports/mail/mailutils/mailutils-3.13/imap4d/ |
| H A D | list.c | 61 size_t reflen; /* Length of the original reference */ member
341 size_t reflen = strlen (ref); in imap4d_list() local
|
| /dports/biology/sra-tools/sra-tools-2.11.0/tools/ref-idx/ |
| H A D | ref_iter.h | 41 uint64_t reflen; /* how many bases does this reference have */ member
|
| /dports/devel/git-svn/git-2.34.1/builtin/ |
| H A D | show-ref.c | 64 int reflen = strlen(refname); in show_ref() local
126 int reflen = buf + len - ref; in exclude_existing() local
|
| /dports/devel/git-p4/git-2.34.1/builtin/ |
| H A D | show-ref.c | 64 int reflen = strlen(refname); in show_ref() local
126 int reflen = buf + len - ref; in exclude_existing() local
|
| /dports/devel/git/git-2.34.1/builtin/ |
| H A D | show-ref.c | 64 int reflen = strlen(refname); in show_ref() local
126 int reflen = buf + len - ref; in exclude_existing() local
|
| /dports/devel/git-gui/git-2.34.1/builtin/ |
| H A D | show-ref.c | 64 int reflen = strlen(refname); in show_ref() local
126 int reflen = buf + len - ref; in exclude_existing() local
|
| /dports/devel/git-cvs/git-2.34.1/builtin/ |
| H A D | show-ref.c | 64 int reflen = strlen(refname); in show_ref() local
126 int reflen = buf + len - ref; in exclude_existing() local
|
| /dports/devel/cgit/cgit-1.2.3/git/builtin/ |
| H A D | show-ref.c | 64 int reflen = strlen(refname); in show_ref() local
126 int reflen = buf + len - ref; in exclude_existing() local
|
| /dports/editors/biew/biew-610/plugins/bin/ |
| H A D | rdoff.h | 37 tUInt8 reflen; /**< length of references */ member
|
| /dports/biology/bcftools/bcftools-1.14/plugins/ |
| H A D | allele-length.c | 34 static uint64_t reflen[MAXLEN]; variable
|
| /dports/biology/bio-mocha/bcftools-1.14/plugins/ |
| H A D | allele-length.c | 34 static uint64_t reflen[MAXLEN]; variable
|
| /dports/print/texinfo/texinfo-6.8/info/ |
| H A D | footnotes.c | 80 int reflen = strlen ("-Footnotes") + strlen (node->nodename); in make_footnotes_node() local
|
| /dports/devel/gdcm/gdcm-3.0.10/Examples/Cxx/ |
| H A D | DumpImageHeaderInfo.cxx | 118 static bool DumpImageHeaderInfo( std::istream & is, size_t reflen ) in DumpImageHeaderInfo()
|
| /dports/math/py-pystan/pystan-2.19.0.0/pystan/stan/lib/stan_math/lib/boost_1.69.0/boost/msm/front/ |
| H A D | internal_row.hpp | 51 struct internal in WPACKET_allocate_bytes()
52 { in WPACKET_allocate_bytes()
|
| /dports/security/p11-kit/p11-kit-0.24.0/trust/ |
| H A D | test-trust.c | 211 long reflen; in test_check_file_msg() local
225 long reflen) in test_check_data_msg()
|
| /dports/net/isc-dhcp44-client/dhcp-4.4.2-P1/common/tests/ |
| H A D | ns_name_test.c | 146 struct data_string* list2, const char *refbuf, size_t reflen) in concat_lists()
|
| /dports/net/isc-dhcp44-relay/dhcp-4.4.2-P1/common/tests/ |
| H A D | ns_name_test.c | 146 struct data_string* list2, const char *refbuf, size_t reflen) in concat_lists()
|
| /dports/net/isc-dhcp44-server/dhcp-4.4.2-P1/common/tests/ |
| H A D | ns_name_test.c | 146 struct data_string* list2, const char *refbuf, size_t reflen) in concat_lists()
|
| /dports/devel/gdcm/gdcm-3.0.10/Testing/Source/MediaStorageAndFileFormat/Cxx/ |
| H A D | TestFileStreamer1.cxx | 110 int reflen = 0; in TestFileStream1() local
|
| /dports/emulators/mess/mame-mame0226/3rdparty/libflac/src/metaflac/ |
| H A D | operations_shorthand_cuesheet.c | 181 size_t reflen; in export_cs_to() local
|
| /dports/emulators/mame/mame-mame0226/3rdparty/libflac/src/metaflac/ |
| H A D | operations_shorthand_cuesheet.c | 181 size_t reflen; in export_cs_to() local
|