Searched defs:sam_buff (Results 1 – 2 of 2) sorted by relevance
| /dports/biology/biolibc/biolibc-0.2.1/ |
| H A D | sam-buff.c | 35 void bl_sam_buff_check_order(bl_sam_buff_t *sam_buff, in bl_sam_buff_check_order()
88 void bl_sam_buff_init(bl_sam_buff_t *sam_buff, unsigned int mapq_min, in bl_sam_buff_init()
153 int bl_sam_buff_add_alignment(bl_sam_buff_t *sam_buff, in bl_sam_buff_add_alignment()
248 void bl_sam_buff_out_of_order(bl_sam_buff_t *sam_buff, bl_sam_t *sam_alignment) in bl_sam_buff_out_of_order()
281 void bl_sam_buff_free_alignment(bl_sam_buff_t *sam_buff, size_t c) in bl_sam_buff_free_alignment()
317 void bl_sam_buff_shift(bl_sam_buff_t *sam_buff, size_t nelem) in bl_sam_buff_shift()
373 bool bl_sam_buff_alignment_ok(bl_sam_buff_t *sam_buff, in bl_sam_buff_alignment_ok()
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| /dports/biology/ad2vcf/ad2vcf-0.1.4/ |
| H A D | ad2vcf.c | 70 bl_sam_buff_t sam_buff; in ad2vcf() local
327 bl_sam_buff_t *sam_buff, FILE *vcf_out_stream, in skip_upstream_alignments()
419 bl_sam_buff_t *sam_buff, FILE *vcf_out_stream, in allelic_depth()
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