/dports/science/py-pymol/pymol-open-source-2.4.0/layer3/ |
H A D | Editor.cpp | 99 int sele1 = SelectorIndexByName(G, cEditorSele1); in EditorDrawDihedral() local 543 int sele1, sele2, sele3, sele4; in EditorLogState() local 602 int sele0, sele1, sele2; in EditorInvert() local 687 int sele0, sele1, sele2; in EditorTorsion() local 891 auto sele1 = SelectorIndexByName(G, cEditorSele2); in EditorCycleValence() local 994 int sele1 = SelectorIndexByName(G, cEditorSele2); in EditorRemove() local 1041 int sele0, sele1; in EditorHFill() local 1086 int sele0, sele1; in EditorHFix() local 1587 int sele1, sele2, sele3, sele4; in EditorRender() local 1786 int sele1, sele2, sele3, sele4; in EditorActivate() local [all …]
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H A D | Selector.cpp | 3039 PyObject *SelectorAsPyList(PyMOLGlobals * G, SelectorID_t sele1) in SelectorAsPyList() 3423 int *pair, int sele1, int *vla1, int sele2, in SelectorCreateAlignments() 3573 int SelectorCheckIntersection(PyMOLGlobals * G, int sele1, int sele2) in SelectorCheckIntersection() 4121 int sele1, int sele2, int sele3, int sele4) in SelectorWalkTree() 4338 SelectorID_t sele1, // in SelectorSubdivide() 5078 int SelectorMapGaussian(PyMOLGlobals * G, int sele1, ObjectMapState * oMap, in SelectorMapGaussian() 5562 int SelectorMapCoulomb(PyMOLGlobals * G, int sele1, ObjectMapState * oMap, in SelectorMapCoulomb() 6051 SelectorID_t sele1, // in SelectorUpdateCmd() 10433 int sele1, int state1, int sele2, int state2, in SelectorGetDistSet() 10754 int sele1, int state1, in SelectorGetAngleSet() [all …]
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H A D | Executive.cpp | 4408 int sele1 = -1; in ExecutiveAssignSS() local 7877 int sele1; in ExecutiveGetVertexVLA() local 8000 int sele1; in ExecutiveSaveUndo() local 9200 int sele1; in ExecutiveFixHydrogens() local 9947 int sele1; in ExecutiveLabel() local 10431 int sele1, sele2; in ExecutiveRMS() local 11177 int sele1, sele2; in ExecutiveRMSPairs() local 11410 int sele1; in ExecutiveCountStates() local 12194 int sele1; in ExecutiveSetSettingFromString() local 12400 int sele1; in ExecutiveUnsetSetting() local [all …]
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/dports/science/py-pymol/pymol-open-source-2.4.0/modules/pymol/ |
H A D | morphing.py | 12 def morph(name, sele1, sele2=None, state1=-1, state2=-1, refinement=3, argument
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H A D | editing.py | 2124 def translate_atom(sele1, v0, v1, v2, state=0, mode=0, argument
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/dports/science/py-pymol/pymol-open-source-2.4.0/layer2/ |
H A D | ObjectDist.cpp | 364 int sele1, int sele2, int mode, float cutoff, in ObjectDistNewFromSele() 470 int sele1, int sele2, int sele3, int mode, in ObjectDistNewFromAngleSele() 566 int sele1, int sele2, int sele3, int sele4, in ObjectDistNewFromDihedralSele()
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H A D | ObjectMolecule.cpp | 645 int ObjectMoleculeXferValences(ObjectMolecule * Ia, int sele1, int sele2, in ObjectMoleculeXferValences() 3257 OrthoLineType sele1, sele2; in ObjectMoleculeFuse() local 4369 int ObjectMoleculeAddBond(ObjectMolecule * I, int sele0, int sele1, int order) in ObjectMoleculeAddBond() 4445 int ObjectMoleculeAdjustBonds(ObjectMolecule * I, int sele0, int sele1, int mode, in ObjectMoleculeAdjustBonds() 4537 int ObjectMoleculeRemoveBonds(ObjectMolecule * I, int sele0, int sele1) in ObjectMoleculeRemoveBonds()
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H A D | ObjectMolecule2.cpp | 1419 void ObjectMoleculeFixChemistry(ObjectMolecule * I, int sele1, int sele2, int invalidate) in ObjectMoleculeFixChemistry()
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/dports/science/py-pymol/pymol-open-source-2.4.0/layer4/ |
H A D | Menu.cpp | 71 const char *name, const char *sele1, const char *sele2) in MenuActivate2Arg()
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H A D | Cmd.cpp | 2085 int sele1 = SelectorIndexByName(G, s1); in CmdGetCoordsAsNumPy() local 3305 char *sele1, *sele2, *source; in CmdRevalence() local 5729 int sele1 = SelectorIndexByName(G, s1); in CmdLoadCoords() local 6004 char *sele1; in CmdReference() local
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