Searched defs:seqWeights (Results 1 – 3 of 3) sorted by relevance
| /dports/biology/clustalw/clustalw-2.1/src/tree/ |
| H A D | TreeInterface.cpp | 32 TreeInterface::getWeightsAndStepsFromDistMat(vector<int>* seqWeights, DistMatrix* distMat, in getWeightsAndStepsFromDistMat()
60 TreeInterface::getWeightsFromDistMat(vector<int>* seqWeights, DistMatrix* distMat, in getWeightsFromDistMat()
106 vector<int>* seqWeights, int fSeq, in getWeightsAndStepsFromTree()
121 string* treeName, vector<int>* seqWeights, int fSeq, in getWeightsFromGuideTree()
196 TreeInterface::getWeightsAndStepsFromDistMatNJ(vector<int>* seqWeights, DistMatrix* distMat, in getWeightsAndStepsFromDistMatNJ()
210 string* treeName, vector<int>* seqWeights, in getWeightsAndStepsUseOldGuideTreeNJ()
259 vector<int>* seqWeights, int fSeq, int nSeqs) in readTreeAndCalcWeightsNJ()
298 TreeInterface::getWeightsFromDistMatNJ(vector<int>* seqWeights, DistMatrix* distMat, in getWeightsFromDistMatNJ()
442 vector<int>* seqWeights, int fSeq, int numSeqs, in getWeightsAndStepsFromTreeNJ()
486 TreeInterface::getWeightsAndStepsFromDistMatUPGMA(vector<int>* seqWeights, in getWeightsAndStepsFromDistMatUPGMA()
[all …]
|
| /dports/biology/clustalw/clustalw-2.1/src/tree/UPGMA/ |
| H A D | RootedGuideTree.cpp | 63 void RootedGuideTree::calcSeqWeights(int firstSeq, int lastSeq, vector<int>* seqWeights) in calcSeqWeights()
133 void RootedGuideTree::calcWeights(vector<int>* seqWeights) in calcWeights()
|
| /dports/biology/clustalw/clustalw-2.1/src/ |
| H A D | Clustal.cpp | 368 vector<int> seqWeights(_numSeqs + 1); in sequencesAlignToProfile() local
838 vector<int> seqWeights(_numSeqs + 1); in doAlignUseOldTree() local
|