/dports/science/openbabel/openbabel-3.1.1/test/ |
H A D | stereotest.cpp | 93 std::vector<unsigned int> symmetry_classes; in doStereoPerception() local 121 std::vector<unsigned int> symmetry_classes; in doStereoPerception2() local 189 std::vector<unsigned int> symmetry_classes; in doStereoPerception3() local
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H A D | graphsymtest.cpp | 101 std::vector<unsigned int> symmetry_classes; in countGraphSymClassesTest() local
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/dports/science/openbabel/openbabel-3.1.1/src/ |
H A D | graphsym.cpp | 495 …GraphSymPrivate::ExtendInvariants(std::vector<std::pair<OBAtom*, unsigned int> > &symmetry_classes) in ExtendInvariants() 559 std::vector<std::pair<OBAtom*, unsigned int> > symmetry_classes; in CalculateSymmetry() local 598 int OBGraphSym::GetSymmetry(std::vector<unsigned int> &symmetry_classes) in GetSymmetry() 628 std::vector<std::pair<OBAtom*, unsigned int> > symmetry_classes; in Iterate() local
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H A D | canon.cpp | 171 …oceneBonds(std::vector<OBBond*> &bonds, OBMol *mol, const std::vector<unsigned int> &symmetry_clas… in findMetalloceneBonds() 709 const std::vector<unsigned int> &symmetry_classes; member 1632 void CanonicalLabels(OBMol *mol, const std::vector<unsigned int> &symmetry_classes, in CanonicalLabels()
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/dports/science/openbabel/openbabel-3.1.1/src/ops/ |
H A D | canonical.cpp | 52 std::vector<unsigned int> symmetry_classes; in Do() local
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/dports/science/molsketch/Molsketch-0.7.2/obabeliface/ |
H A D | obabeliface.cpp | 229 void getSymmetryClasses(const Molecule* molecule, std::vector<unsigned int>& symmetry_classes) in getSymmetryClasses() 246 std::vector<unsigned int> symmetry_classes; in chiralAtoms() local
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/dports/science/openbabel/openbabel-3.1.1/src/formats/ |
H A D | smilesformat.cpp | 2682 vector<unsigned int> &symmetry_classes, in GetSmilesElement() 2939 vector<unsigned int> &symmetry_classes) in GetTetrahedralStereo() 2991 vector<unsigned int> &symmetry_classes) in GetSquarePlanarStereo() 3395 vector<unsigned int> &symmetry_classes, in ToCansmilesString() 3590 vector<unsigned int> &symmetry_classes, in StandardLabels() 3615 vector<unsigned int> &symmetry_classes, in RandomLabels() 3809 vector<unsigned int> symmetry_classes, canonical_order; in CreateFragCansmiString() local
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/dports/science/openbabel/openbabel-3.1.1/src/stereo/ |
H A D | perception.cpp | 485 bool ApplyRule1(const Type ¤tPara, const std::vector<unsigned int> &symmetry_classes, in ApplyRule1() 601 …void StartRule1(const std::vector<unsigned int> &symmetry_classes, const std::vector<StereoRing> &… in StartRule1() 1856 std::vector<unsigned int> symmetry_classes = FindSymmetry(mol); in StereoFrom0D() local 2078 std::vector<unsigned int> symmetry_classes = FindSymmetry(mol); in StereoFrom3D() local 2360 std::vector<unsigned int> symmetry_classes = FindSymmetry(mol); in StereoFrom2D() local
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/dports/science/openbabel/openbabel-3.1.1/src/depict/ |
H A D | depict.cpp | 276 std::vector<unsigned int> symmetry_classes; in GetAtomSymClass() local
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/dports/science/openbabel/openbabel-3.1.1/scripts/R/examples/openbabelR/src/ |
H A D | openbabel-R.cpp | 20994 SWIGEXPORT SEXP R_swig_OBGraphSym_GetSymmetry ( SEXP self, SEXP symmetry_classes, SEXP s_swig_copy)… in R_swig_OBGraphSym_GetSymmetry() 21279 R_swig_FindAutomorphisms__SWIG_0 ( SEXP mol, SEXP aut, SEXP symmetry_classes, SEXP mask, SEXP maxMe… in R_swig_FindAutomorphisms__SWIG_0() 21311 SWIGEXPORT SEXP R_swig_FindAutomorphisms__SWIG_1 ( SEXP mol, SEXP aut, SEXP symmetry_classes, SEXP … in R_swig_FindAutomorphisms__SWIG_1() 21341 SWIGEXPORT SEXP R_swig_FindAutomorphisms__SWIG_2 ( SEXP mol, SEXP aut, SEXP symmetry_classes, SEXP … in R_swig_FindAutomorphisms__SWIG_2() 21430 SWIGEXPORT SEXP R_swig_FindAutomorphisms__SWIG_6 ( SEXP functor, SEXP mol, SEXP symmetry_classes, S… in R_swig_FindAutomorphisms__SWIG_6() 21456 SWIGEXPORT SEXP R_swig_FindAutomorphisms__SWIG_7 ( SEXP functor, SEXP mol, SEXP symmetry_classes) { in R_swig_FindAutomorphisms__SWIG_7() 21758 R_swig_CanonicalLabels__SWIG_0 ( SEXP mol, SEXP symmetry_classes, SEXP canonical_labels, SEXP mask,… in R_swig_CanonicalLabels__SWIG_0() 21788 R_swig_CanonicalLabels__SWIG_1 ( SEXP mol, SEXP symmetry_classes, SEXP canonical_labels, SEXP mask,… in R_swig_CanonicalLabels__SWIG_1() 21816 SWIGEXPORT SEXP R_swig_CanonicalLabels__SWIG_2 ( SEXP mol, SEXP symmetry_classes, SEXP canonical_la… in R_swig_CanonicalLabels__SWIG_2() 21844 SWIGEXPORT SEXP R_swig_CanonicalLabels__SWIG_3 ( SEXP mol, SEXP symmetry_classes, SEXP canonical_la… in R_swig_CanonicalLabels__SWIG_3()
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