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Searched defs:transcript1 (Results 1 – 8 of 8) sorted by relevance

/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/utils/codecs/gtf/
H A DGencodeGtfCodecUnitTest.java173 …final GencodeGtfTranscriptFeature transcript1 = (GencodeGtfTranscriptFeature) GencodeGtfFeature.cr… in createGencodeGtfGene_gencode_valid_gencode_file2() local
1285 …final GencodeGtfTranscriptFeature transcript1 = (GencodeGtfTranscriptFeature) GencodeGtfFeature.cr… in createGencodeGtfGene_gencode_and_this_is_a_valid_one_too_table() local
2413 …final GencodeGtfTranscriptFeature transcript1 = (GencodeGtfTranscriptFeature) GencodeGtfFeature.cr… in createGencodeGtfGene_gencode_v19_valid_gencode_file2() local
3101 …final GencodeGtfTranscriptFeature transcript1 = (GencodeGtfTranscriptFeature) GencodeGtfFeature.cr… in createGencodeGtfGene_gencode_v19_and_this_is_a_valid_one_too() local
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/funcotator/dataSources/gencode/
H A DDataProviderForExampleGencodeGtfGene.java38 …final GencodeGtfTranscriptFeature transcript1 = (GencodeGtfTranscriptFeature) GencodeGtfFeature.cr… in createGencodeGtfGeneFeature() local
466 …final GencodeGtfTranscriptFeature transcript1 = (GencodeGtfTranscriptFeature) GencodeGtfFeature.cr… in dynamicallyCreateTestGencodeGtfGeneFeature() local
H A DGencodeFuncotationFactoryUnitTest.java715 …final GencodeGtfTranscriptFeature transcript1 = (GencodeGtfTranscriptFeature) GencodeGtfFeature.cr… in provideForCreateDefaultFuncotationsOnProblemVariant() local
/dports/security/fizz/fizz-2021.12.27.00/fizz/protocol/test/
H A DKeySchedulerTest.cpp186 StringPiece transcript1("transcript1"); in TEST_F() local
/dports/biology/emboss/EMBOSS-6.6.0/ajax/ensembl/
H A Denstranscript.c4422 AjBool ensTranscriptSimilarity(EnsPTranscript transcript1, in ensTranscriptSimilarity()
7097 EnsPTranscript transcript1 = *(EnsOTranscript *const *) item1; in listTranscriptCompareEndAscending() local
7149 EnsPTranscript transcript1 = *(EnsOTranscript *const *) item1; in listTranscriptCompareEndDescending() local
7201 EnsPTranscript transcript1 = *(EnsOTranscript *const *) item1; in listTranscriptCompareIdentifierAscending() local
7258 EnsPTranscript transcript1 = *(EnsOTranscript *const *) item1; in listTranscriptCompareStartAscending() local
7310 EnsPTranscript transcript1 = *(EnsOTranscript *const *) item1; in listTranscriptCompareStartDescending() local
H A Densgene.c2980 EnsPTranscript transcript1 = NULL; in ensGeneSimilarity() local
/dports/biology/jalview/jalview/test/jalview/io/vcf/
H A DVCFLoaderTest.java269 SequenceI transcript1 = alignment.findName("transcript1"); in buildAlignment() local
/dports/biology/artemis/artemis-17.0.1-11-g3e43d27e/uk/ac/sanger/artemis/components/
H A DEditMenu.java1463 final uk.ac.sanger.artemis.io.Feature transcript1 = chadoGene.getTranscripts().get(0); in gffMergeFeatures() local