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Searched defs:uSeqCount1 (Results 1 – 16 of 16) sorted by relevance

/dports/biology/muscle/muscle-3.8.1551/
H A Dprofdb.cpp27 const unsigned uSeqCount1 = msa1.GetSeqCount(); in ProfDB() local
H A Dppscore.cpp75 const unsigned uSeqCount1 = msa1.GetSeqCount(); in PPScore() local
H A Dlocal.cpp70 const unsigned uSeqCount1 = msa1.GetSeqCount(); in Local() local
H A Dobjscore.cpp12 unsigned uSeqCount1, const unsigned SeqIndexes2[], unsigned uSeqCount2) in ObjScore()
H A Dprofile.cpp138 const unsigned uSeqCount1 = msa1.GetSeqCount(); in Profile() local
H A Dsptest.cpp71 const unsigned uSeqCount1 = msa1.GetSeqCount(); in SPTest() local
H A Dobjscore2.cpp378 const unsigned uSeqCount1 = msa1.GetSeqCount(); in ObjScoreDP_Profs() local
477 const unsigned uSeqCount1 = msa1.GetSeqCount(); in ObjScoreXP() local
H A Dmsa2.cpp298 const unsigned uSeqCount1 = msa1.GetSeqCount(); in AssertMSAEqIgnoreCaseAndGaps() local
327 const unsigned uSeqCount1 = msa1.GetSeqCount(); in AssertMSAEq() local
/dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/umuscle/src/muscle/
H A Dprofdb.cpp33 const unsigned uSeqCount1 = msa1.GetSeqCount(); in ProfDB() local
H A Dppscore.cpp74 const unsigned uSeqCount1 = msa1.GetSeqCount(); in PPScore() local
H A Dlocal.cpp73 const unsigned uSeqCount1 = msa1.GetSeqCount(); in Local() local
H A Dobjscore.cpp13 unsigned uSeqCount1, const unsigned SeqIndexes2[], unsigned uSeqCount2) in ObjScore()
H A Dprofile.cpp142 const unsigned uSeqCount1 = msa1.GetSeqCount(); in Profile() local
H A Dsptest.cpp71 const unsigned uSeqCount1 = msa1.GetSeqCount(); in SPTest() local
H A Dmsa2.cpp310 const unsigned uSeqCount1 = msa1.GetSeqCount(); in AssertMSAEqIgnoreCaseAndGaps() local
339 const unsigned uSeqCount1 = msa1.GetSeqCount(); in AssertMSAEq() local
H A Dobjscore2.cpp495 const unsigned uSeqCount1 = msa1.GetSeqCount(); in ObjScoreXP() local