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Searched defs:use_syn (Results 1 – 7 of 7) sorted by relevance

/dports/biology/wise/wise2.4.1/src/models/
H A Destwrap.c90 … ext,boolean is_global,RandomModelDNA * rmd,int alg,RandomModel * rm,boolean use_syn,Probability a… in AlnBlock_from_Protein_estwise_wrap()
143 …r * cp,CodonMapper * cm,CodonTable * ct,RandomModelDNA * rmd,int alg,boolean use_syn,boolean force… in AlnBlock_from_TSM_estwise_wrap()
279 …b,cDNADB * cdb,cDNAParser * cp,CodonMapper * cm,RandomModelDNA * rmd,boolean use_syn,int alg,doubl… in Hscore_from_TSM_estwise()
H A Dgwrap.c138 …r21 * gpara,RandomModelDNA * rmd,RandomModelDNA * intergenic,int alg,boolean use_syn,RandomModel *… in AlnBlock_from_protein_genewise_wrap()
207 …Parameter21 * gpara,RandomModelDNA * rmd,RandomModelDNA * intergenic,boolean use_syn,int alg,Proba… in AlnBlock_from_TSM_genewise_wrap()
510 …Parameter21 * gpara,RandomModelDNA * rmd,RandomModelDNA * intergenic,boolean use_syn,int alg,doubl… in Hscore_from_TSM_genewise()
H A Dgenewisemodeldb.c255 …eStateDB * tdb,cDNAParser * cp,CodonMapper * cm,RandomModelDNA * rmd,boolean use_syn,boolean flat_… in new_GeneWiseDB_cdna()
290 …eWiseDB(ThreeStateDB * tdb,GeneParameter21 * gp,RandomModelDNA * rmd,boolean use_syn,Probability a… in new_GeneWiseDB()
H A Destwise.c78 boolean use_syn = FALSE; variable
H A Dgenewise.c114 boolean use_syn = FALSE; variable
H A Destwisedb.c117 boolean use_syn = TRUE; variable
H A Dgenewisedb.c130 boolean use_syn = FALSE; variable