| /dports/biology/wise/wise2.4.1/src/models/ |
| H A D | motifmatrixdp.dy | 5 #define MOTIF_MATRIX_IN(motif,i,j,score) (motif->mat[i][j] == 0 ? 0 : (score))
13 resource type="MotifConsMatrix*" name="motif"
41 …calc="MOTIF_MATRIX_IN(motif,i,j,ms->comp_in_motif->score[DNA_BASE(query,i)][DNA_BASE(target,j)]) +…
52 …calc="MOTIF_MATRIX_IN(motif,i,j,ms->comp_in_motif->score[DNA_BASE(query,i)][DNA_BASE(target,j)]) +…
|
| /dports/biology/p5-BioPerl-Run/BioPerl-Run-1.007003/t/data/ |
| H A D | prints.dat | 8 mi; GPCR transmembrane motif I - 3
71 mi; GPCR transmembrane motif II - 3
134 mi; GPCR transmembrane motif III - 3
197 mi; GPCR transmembrane motif IV - 3
260 mi; GPCR transmembrane motif V - 3
323 mi; GPCR transmembrane motif VI - 3
386 mi; GPCR transmembrane motif VII - 3
|
| /dports/x11-toolkits/lesstif/lesstif-0.95.2/test/Xm-2.0/ |
| H A D | Makefile.am | 11 motif-tests: motif-tests-recursive
13 motif-tests-recursive:
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| /dports/science/py-pymatgen/pymatgen-2022.0.15/pymatgen/analysis/defects/ |
| H A D | utils.py | 270 for motif in self._motif_types:
273 cn = int(motif_cn_op[motif]["cn"])
380 for motif in unique_motifs:
381 labels[motif] = []
383 labels[motif].append(i if ts["mtype"] == motif else -1)
395 if connected[i][j] and labels[motif][i] != labels[motif][j]:
396 if labels[motif][i] < labels[motif][j]:
397 labels[motif][j] = labels[motif][i]
399 labels[motif][i] = labels[motif][j]
403 for l in labels[motif]:
[all …]
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| /dports/net-mgmt/nagios-check_bacula11/bacula-11.0.5/src/lib/ |
| H A D | breg.c | 32 BREGEXP *new_bregexp(const char *motif) in new_bregexp() argument
38 if (!self->extract_regexp(motif)) { in new_bregexp()
133 bool BREGEXP::extract_regexp(const char *motif) in extract_regexp() argument
135 if ( !motif ) { in extract_regexp()
139 char sep = motif[0]; in extract_regexp()
157 char *search = (char *) motif + 1; in extract_regexp()
162 char *dest = expr = bstrdup(motif); in extract_regexp()
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| /dports/net-mgmt/nagios-check_bacula9/bacula-9.6.7/src/lib/ |
| H A D | breg.c | 32 BREGEXP *new_bregexp(const char *motif) in new_bregexp() argument
38 if (!self->extract_regexp(motif)) { in new_bregexp()
133 bool BREGEXP::extract_regexp(const char *motif) in extract_regexp() argument
135 if ( !motif ) { in extract_regexp()
139 char sep = motif[0]; in extract_regexp()
157 char *search = (char *) motif + 1; in extract_regexp()
162 char *dest = expr = bstrdup(motif); in extract_regexp()
|
| /dports/sysutils/bacula11-client/bacula-11.0.5/src/lib/ |
| H A D | breg.c | 32 BREGEXP *new_bregexp(const char *motif) in new_bregexp() argument
38 if (!self->extract_regexp(motif)) { in new_bregexp()
133 bool BREGEXP::extract_regexp(const char *motif) in extract_regexp() argument
135 if ( !motif ) { in extract_regexp()
139 char sep = motif[0]; in extract_regexp()
157 char *search = (char *) motif + 1; in extract_regexp()
162 char *dest = expr = bstrdup(motif); in extract_regexp()
|
| /dports/sysutils/bacula11-server/bacula-11.0.5/src/lib/ |
| H A D | breg.c | 32 BREGEXP *new_bregexp(const char *motif) in new_bregexp() argument
38 if (!self->extract_regexp(motif)) { in new_bregexp()
133 bool BREGEXP::extract_regexp(const char *motif) in extract_regexp() argument
135 if ( !motif ) { in extract_regexp()
139 char sep = motif[0]; in extract_regexp()
157 char *search = (char *) motif + 1; in extract_regexp()
162 char *dest = expr = bstrdup(motif); in extract_regexp()
|
| /dports/sysutils/bacula11-client-static/bacula-11.0.5/src/lib/ |
| H A D | breg.c | 32 BREGEXP *new_bregexp(const char *motif) in new_bregexp() argument
38 if (!self->extract_regexp(motif)) { in new_bregexp()
133 bool BREGEXP::extract_regexp(const char *motif) in extract_regexp() argument
135 if ( !motif ) { in extract_regexp()
139 char sep = motif[0]; in extract_regexp()
157 char *search = (char *) motif + 1; in extract_regexp()
162 char *dest = expr = bstrdup(motif); in extract_regexp()
|
| /dports/sysutils/bacula9-client-static/bacula-9.6.7/src/lib/ |
| H A D | breg.c | 32 BREGEXP *new_bregexp(const char *motif) in new_bregexp() argument
38 if (!self->extract_regexp(motif)) { in new_bregexp()
133 bool BREGEXP::extract_regexp(const char *motif) in extract_regexp() argument
135 if ( !motif ) { in extract_regexp()
139 char sep = motif[0]; in extract_regexp()
157 char *search = (char *) motif + 1; in extract_regexp()
162 char *dest = expr = bstrdup(motif); in extract_regexp()
|
| /dports/sysutils/bacula9-client/bacula-9.6.7/src/lib/ |
| H A D | breg.c | 32 BREGEXP *new_bregexp(const char *motif) in new_bregexp() argument
38 if (!self->extract_regexp(motif)) { in new_bregexp()
133 bool BREGEXP::extract_regexp(const char *motif) in extract_regexp() argument
135 if ( !motif ) { in extract_regexp()
139 char sep = motif[0]; in extract_regexp()
157 char *search = (char *) motif + 1; in extract_regexp()
162 char *dest = expr = bstrdup(motif); in extract_regexp()
|
| /dports/sysutils/bacula9-server/bacula-9.6.7/src/lib/ |
| H A D | breg.c | 32 BREGEXP *new_bregexp(const char *motif) in new_bregexp() argument
38 if (!self->extract_regexp(motif)) { in new_bregexp()
133 bool BREGEXP::extract_regexp(const char *motif) in extract_regexp() argument
135 if ( !motif ) { in extract_regexp()
139 char sep = motif[0]; in extract_regexp()
157 char *search = (char *) motif + 1; in extract_regexp()
162 char *dest = expr = bstrdup(motif); in extract_regexp()
|
| /dports/biology/vt/vt-0.57721/ |
| H A D | motif_tree.cpp | 211 bool MotifTree::exist_two_copies(std::string& seq, std::string& motif) in exist_two_copies() argument
214 for (uint32_t i=0; i<motif.size(); ++i) in exist_two_copies()
216 std::string ru = shift_str(motif, i); in exist_two_copies()
335 std::string motif = mm->seq2str(mm->index2seq(i->first), tree[i->first].len); in detect_candidate_motifs() local
336 if (exist_two_copies(s, motif)) in detect_candidate_motifs()
338 … if (debug) std::cerr << motif << " : " << p << " " << tree[i->first].len << " " << f << "\n"; in detect_candidate_motifs()
339 pcm.push(CandidateMotif(motif, p, tree[i->first].len, f)); in detect_candidate_motifs()
343 …if (debug) std::cerr << motif << " : " << p << " " << tree[i->first].len << " " << f << " (< 2 cop… in detect_candidate_motifs()
344 pcm.push(CandidateMotif(motif, p, tree[i->first].len, f)); in detect_candidate_motifs()
|
| /dports/dns/ares/ares-1.1.1/ |
| H A D | aclocal.m4 | 127 [if test "$motif" != yes; then
128 CPPFLAGS="$CPPFLAGS -I$motif/include"
129 LDFLAGS="$LDFLAGS -L$motif/lib"
134 [AC_ARG_WITH(motif,
135 [ --with-motif=PREFIX Use Motif],
136 [motif="$withval"], [motif=no])
137 if test "$motif" != no; then
145 [AC_ARG_WITH(motif,
146 [ --with-motif=PREFIX Specify location of Motif],
147 [motif="$withval"], [motif=yes])
[all …]
|
| /dports/x11-toolkits/xbae/xbae-4.60.4/ |
| H A D | ac_find_motif.m4 | 18 dnl Oleo CVS Id: motif.m4,v 1.9 1999/04/09 11:46:49 danny
30 dnl AC_ARG_WITH(motif,
31 dnl [ --without-motif do not use Motif widgets])
32 dnl Treat --without-motif like
33 dnl --without-motif-includes --without-motif-libraries.
40 AC_ARG_WITH(motif-includes,
41 [ --with-motif-includes=DIR Motif include files are in DIR],
44 AC_ARG_WITH(motif-libraries,
45 [ --with-motif-libraries=DIR Motif libraries are in DIR],
|
| /dports/x11-toolkits/lesstif/lesstif-0.95.2/scripts/autoconf/ |
| H A D | ac_find_motif.m4 | 18 dnl Oleo CVS Id: motif.m4,v 1.9 1999/04/09 11:46:49 danny
30 dnl AC_ARG_WITH(motif,
31 dnl [ --without-motif do not use Motif widgets])
32 dnl Treat --without-motif like
33 dnl --without-motif-includes --without-motif-libraries.
40 AC_ARG_WITH(motif-includes,
41 [ --with-motif-includes=DIR Motif include files are in DIR],
44 AC_ARG_WITH(motif-libraries,
45 [ --with-motif-libraries=DIR Motif libraries are in DIR],
|
| /dports/lang/elk/elk-3.99.8/examples/ |
| H A D | Makefile.in | 302 motif/scroll-bar.scm \
303 motif/radio.scm \
305 motif/drawing-area.scm \
306 motif/radio-stuff.scm \
307 motif/popup-menu.scm \
308 motif/pulldown-menu.scm \
309 motif/main-window.scm \
310 motif/menu-stuff.scm \
311 motif/vcr.scm \
312 motif/option-menu.scm \
[all …]
|
| /dports/x11-toolkits/wxgtk31/wxWidgets-3.1.5/build/ |
| H A D | files | 1697 src/motif/dc.cpp
1768 wx/motif/accel.h
1769 wx/motif/app.h
1786 wx/motif/dc.h
1792 wx/motif/dnd.h
1794 wx/motif/font.h
1795 wx/motif/frame.h
1796 wx/motif/gauge.h
1797 wx/motif/icon.h
1799 wx/motif/menu.h
[all …]
|
| /dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/test/jdk/javax/swing/JSplitPane/4514858/ |
| H A D | bug4514858.java | 97 JButton motif = new JButton("Motif"); in createAndShowGUI() local
98 motif.setActionCommand("Motif"); in createAndShowGUI()
99 motif.setEnabled(isSupportedLAF("com.sun.java.swing.plaf.motif.MotifLookAndFeel")); in createAndShowGUI()
100 motif.addActionListener(this); in createAndShowGUI()
101 p.add(motif); in createAndShowGUI()
|
| /dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/test/jdk/javax/swing/JSplitPane/4514858/ |
| H A D | bug4514858.java | 97 JButton motif = new JButton("Motif"); in createAndShowGUI() local
98 motif.setActionCommand("Motif"); in createAndShowGUI()
99 motif.setEnabled(isSupportedLAF("com.sun.java.swing.plaf.motif.MotifLookAndFeel")); in createAndShowGUI()
100 motif.addActionListener(this); in createAndShowGUI()
101 p.add(motif); in createAndShowGUI()
|
| /dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/test/jdk/javax/swing/JSplitPane/4514858/ |
| H A D | bug4514858.java | 97 JButton motif = new JButton("Motif"); in createAndShowGUI() local
98 motif.setActionCommand("Motif"); in createAndShowGUI()
99 motif.setEnabled(isSupportedLAF("com.sun.java.swing.plaf.motif.MotifLookAndFeel")); in createAndShowGUI()
100 motif.addActionListener(this); in createAndShowGUI()
101 p.add(motif); in createAndShowGUI()
|
| /dports/java/openjdk12/openjdk-jdk12u-jdk-12.0.2-10-4/test/jdk/javax/swing/JSplitPane/4514858/ |
| H A D | bug4514858.java | 97 JButton motif = new JButton("Motif"); in createAndShowGUI() local
98 motif.setActionCommand("Motif"); in createAndShowGUI()
99 motif.setEnabled(isSupportedLAF("com.sun.java.swing.plaf.motif.MotifLookAndFeel")); in createAndShowGUI()
100 motif.addActionListener(this); in createAndShowGUI()
101 p.add(motif); in createAndShowGUI()
|
| /dports/java/openjdk15/jdk15u-jdk-15.0.6-1-1/test/jdk/javax/swing/JSplitPane/4514858/ |
| H A D | bug4514858.java | 97 JButton motif = new JButton("Motif"); in createAndShowGUI() local
98 motif.setActionCommand("Motif"); in createAndShowGUI()
99 motif.setEnabled(isSupportedLAF("com.sun.java.swing.plaf.motif.MotifLookAndFeel")); in createAndShowGUI()
100 motif.addActionListener(this); in createAndShowGUI()
101 p.add(motif); in createAndShowGUI()
|
| /dports/java/openjdk16/jdk16u-jdk-16.0.2-7-1/test/jdk/javax/swing/JSplitPane/4514858/ |
| H A D | bug4514858.java | 97 JButton motif = new JButton("Motif"); in createAndShowGUI() local
98 motif.setActionCommand("Motif"); in createAndShowGUI()
99 motif.setEnabled(isSupportedLAF("com.sun.java.swing.plaf.motif.MotifLookAndFeel")); in createAndShowGUI()
100 motif.addActionListener(this); in createAndShowGUI()
101 p.add(motif); in createAndShowGUI()
|
| /dports/java/openjdk14/jdk14u-jdk-14.0.2-12-1/test/jdk/javax/swing/JSplitPane/4514858/ |
| H A D | bug4514858.java | 97 JButton motif = new JButton("Motif"); in createAndShowGUI() local
98 motif.setActionCommand("Motif"); in createAndShowGUI()
99 motif.setEnabled(isSupportedLAF("com.sun.java.swing.plaf.motif.MotifLookAndFeel")); in createAndShowGUI()
100 motif.addActionListener(this); in createAndShowGUI()
101 p.add(motif); in createAndShowGUI()
|