| /dports/biology/bcftools/bcftools-1.14/test/csq/ENST00000536784/ |
| H A D | ENST00000536784.gff | 7 11 havana CDS 467 483 . - 2 ID=CDS:ENSP00000441694;Parent=transcript:ENST00000536784;protein_id=ENS…
9 11 havana CDS 787 901 . - 0 ID=CDS:ENSP00000441694;Parent=transcript:ENST00000536784;protein_id=ENS…
|
| /dports/biology/bio-mocha/bcftools-1.14/test/csq/ENST00000375992/ |
| H A D | ENST00000375992.gff | 5 X ensembl_havana CDS 1759 1759 . - 1 ID=CDS:ENSP00000365160;Parent=transcript:ENST00000375992;prote…
6 X ensembl_havana CDS 5961 6454 . - 0 ID=CDS:ENSP00000365160;Parent=transcript:ENST00000375992;prote…
|
| /dports/biology/bcftools/bcftools-1.14/test/csq/ENST00000368801/ |
| H A D | ENST00000368801.gff | 5 1 ensembl_havana CDS 1015 9429 . - 0 ID=CDS:ENSP00000357791;Parent=transcript:ENST00000368801;prote…
6 1 ensembl_havana CDS 11055 11192 . - 0 ID=CDS:ENSP00000357791;Parent=transcript:ENST00000368801;pro…
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/unit_test/gff3reader_test_cases/ |
| H A D | rw-228.gff3 | 19 …CDS 20968 21079 . - 0 ID=cds0;Parent=rna0;Dbxref=GeneID:16640,Genbank:NP_034781.2,MGI:MGI:1321153;…
20 …CDS 19497 19586 . - 2 ID=cds0;Parent=rna0;Dbxref=GeneID:16640,Genbank:NP_034781.2,MGI:MGI:1321153;…
24 …CDS 8935 9070 . - 1 ID=cds0;Parent=rna0;Dbxref=GeneID:16640,Genbank:NP_034781.2,MGI:MGI:1321153;Na…
129 …CDS 332677 332788 . - 0 ID=cds5;Parent=rna6;Dbxref=GeneID:16627,Genbank:NP_057868.2,MGI:MGI:101907…
130 …CDS 331125 331214 . - 2 ID=cds5;Parent=rna6;Dbxref=GeneID:16627,Genbank:NP_057868.2,MGI:MGI:101907…
131 …CDS 329779 329982 . - 2 ID=cds5;Parent=rna6;Dbxref=GeneID:16627,Genbank:NP_057868.2,MGI:MGI:101907…
132 …CDS 327324 327466 . - 2 ID=cds5;Parent=rna6;Dbxref=GeneID:16627,Genbank:NP_057868.2,MGI:MGI:101907…
133 …CDS 324930 325033 . - 0 ID=cds5;Parent=rna6;Dbxref=GeneID:16627,Genbank:NP_057868.2,MGI:MGI:101907…
134 …CDS 316238 316373 . - 1 ID=cds5;Parent=rna6;Dbxref=GeneID:16627,Genbank:NP_057868.2,MGI:MGI:101907…
160 …CDS 538388 538622 . - 0 ID=cds6;Parent=rna7;Dbxref=GeneID:100504950,Genbank:XP_017174535.1,MGI:MGI…
[all …]
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/unit_test/gff3reader_test_cases_genbank/ |
| H A D | rw-228.gff3 | 19 …CDS 20968 21079 . - 0 ID=cds0;Parent=rna0;Dbxref=GeneID:16640,Genbank:NP_034781.2,MGI:MGI:1321153;…
20 …CDS 19497 19586 . - 2 ID=cds0;Parent=rna0;Dbxref=GeneID:16640,Genbank:NP_034781.2,MGI:MGI:1321153;…
24 …CDS 8935 9070 . - 1 ID=cds0;Parent=rna0;Dbxref=GeneID:16640,Genbank:NP_034781.2,MGI:MGI:1321153;Na…
129 …CDS 332677 332788 . - 0 ID=cds5;Parent=rna6;Dbxref=GeneID:16627,Genbank:NP_057868.2,MGI:MGI:101907…
130 …CDS 331125 331214 . - 2 ID=cds5;Parent=rna6;Dbxref=GeneID:16627,Genbank:NP_057868.2,MGI:MGI:101907…
131 …CDS 329779 329982 . - 2 ID=cds5;Parent=rna6;Dbxref=GeneID:16627,Genbank:NP_057868.2,MGI:MGI:101907…
132 …CDS 327324 327466 . - 2 ID=cds5;Parent=rna6;Dbxref=GeneID:16627,Genbank:NP_057868.2,MGI:MGI:101907…
133 …CDS 324930 325033 . - 0 ID=cds5;Parent=rna6;Dbxref=GeneID:16627,Genbank:NP_057868.2,MGI:MGI:101907…
134 …CDS 316238 316373 . - 1 ID=cds5;Parent=rna6;Dbxref=GeneID:16627,Genbank:NP_057868.2,MGI:MGI:101907…
160 …CDS 538388 538622 . - 0 ID=cds6;Parent=rna7;Dbxref=GeneID:100504950,Genbank:XP_017174535.1,MGI:MGI…
[all …]
|
| /dports/biology/gatk/gatk-4.2.0.0/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/small_pik3ca_dbsnp_ds/gencode_pik3ca/hg19/ |
| H A D | gencode.v19.PIK3CA_transcript.fasta.fai | 1 …OTTHUMG00000157311.2|OTTHUMT00000348478.1|PIK3CA-002|PIK3CA|245|UTR5:1-182|CDS:183-245| 245 125 24…
2 …TTHUMG00000157311.2|OTTHUMT00000348409.2|PIK3CA-001|PIK3CA|9093|UTR5:1-157|CDS:158-3364|UTR3:3365-…
3 …OTTHUMG00000157311.2|OTTHUMT00000348479.1|PIK3CA-003|PIK3CA|620|UTR5:1-266|CDS:267-620| 620 9732 6…
|
| H A D | gencode.v19.PIK3CA_transcript.fasta | 1 …000121879.3|OTTHUMG00000157311.2|OTTHUMT00000348478.1|PIK3CA-002|PIK3CA|245|UTR5:1-182|CDS:183-245|
3 …TTHUMG00000157311.2|OTTHUMT00000348409.2|PIK3CA-001|PIK3CA|9093|UTR5:1-157|CDS:158-3364|UTR3:3365-…
5 …000121879.3|OTTHUMG00000157311.2|OTTHUMT00000348479.1|PIK3CA-003|PIK3CA|620|UTR5:1-266|CDS:267-620|
|
| /dports/biology/py-gffutils/gffutils-0.10.1/gffutils/test/data/ |
| H A D | intro_docs_example.gff | 8 2L FlyBase CDS 7680 8116 . + 0 Name=CG11023-cds;Parent=FBtr0300689,FBtr0300690;parent_type=mRNA
9 2L FlyBase CDS 7680 8116 . + 0 Name=CG11023-cds;Parent=FBtr0330654;parent_type=mRNA
14 2L FlyBase CDS 8193 8610 . + 1 Name=CG11023-cds;Parent=FBtr0300689;parent_type=mRNA
15 2L FlyBase CDS 8193 8589 . + 1 Name=CG11023-cds;Parent=FBtr0300690;parent_type=mRNA
18 2L FlyBase CDS 8229 8610 . + 1 Name=CG11023-cds;Parent=FBtr0330654;parent_type=mRNA
24 2L FlyBase CDS 8668 9276 . + 0 Name=CG11023-cds;Parent=FBtr0300690;parent_type=mRNA
|
| /dports/java/openjdk16/jdk16u-jdk-16.0.2-7-1/src/java.base/share/classes/java/lang/invoke/ |
| H A D | LambdaProxyClassArchive.java | 29 import jdk.internal.misc.CDS;
74 if (!CDS.isDumpingArchive()) in register()
104 if (CDS.isDumpingArchive()) in find()
108 …!CDS.isSharingEnabled() || isSerializable || markerInterfaces.length > 0 || additionalBridges.leng… in find()
|
| /dports/java/openjdk17/jdk17u-jdk-17.0.1-12-1/src/java.base/share/classes/java/lang/invoke/ |
| H A D | LambdaProxyClassArchive.java | 29 import jdk.internal.misc.CDS;
74 if (!CDS.isDumpingArchive()) in register()
104 if (CDS.isDumpingArchive()) in find()
108 … !CDS.isSharingEnabled() || isSerializable || altInterfaces.length > 0 || altMethods.length > 0) in find()
|
| /dports/dns/samba-nsupdate/bind-9.16.5/bin/tests/system/checkzone/zones/ |
| H A D | bad-cds.db | 4 ; Actual CDS
5 ; example. 0 CDS 14364 10 2 FD03B2312C8F0FE72C1751EFA1007D743C94EC91594FF0047C23C37CE119BA0C
6 example. 0 CDS 14364 10 2 FD03B2312C8F0FE72C1751EFA1007D743C94EC91594FF0047C23C37CE119BA0B
|
| /dports/emulators/qemu42/qemu-4.2.1/roms/u-boot/doc/ |
| H A D | README.mpc85xxcds | 4 The CDS family of boards consists of a PCI backplane called the
9 applies to the 85xx CDS boards as well. In particular the toolchain,
21 The 85xx CDS code base is known to compile using:
29 platform to allow for utilization of all 85xx CDS devices. The memory
31 configured for MPC85xx CDS has been updated to reflect the new memory
54 The CDS board has two flash banks, each 8MB in size (2^23 = 0x00800000).
113 When using PCI, linux needs to know to which slot the CDS carrier is
119 SW2=xxxxxx00 PCI SLOT INFORM: The CDS carrier is in slot0 of the Arcadia
120 xxxxxx01 PCI SLOT INFORM: The CDS carrier is in slot1 of the Arcadia
121 xxxxxx10 PCI SLOT INFORM: The CDS carrier is in slot2 of the Arcadia
[all …]
|
| /dports/emulators/qemu-utils/qemu-4.2.1/roms/u-boot-sam460ex/doc/ |
| H A D | README.mpc85xxcds | 4 The CDS family of boards consists of a PCI backplane called the
9 applies to the 85xx CDS boards as well. In particular the toolchain,
21 The 85xx CDS code base is known to compile using:
29 platform to allow for utilization of all 85xx CDS devices. The memory
31 configured for MPC85xx CDS has been updated to reflect the new memory
54 The CDS board has two flash banks, each 8MB in size (2^23 = 0x00800000).
113 When using PCI, linux needs to know to which slot the CDS carrier is
119 SW2=xxxxxx00 PCI SLOT INFORM: The CDS carrier is in slot0 of the Arcadia
120 xxxxxx01 PCI SLOT INFORM: The CDS carrier is in slot1 of the Arcadia
121 xxxxxx10 PCI SLOT INFORM: The CDS carrier is in slot2 of the Arcadia
[all …]
|
| /dports/emulators/qemu5/qemu-5.2.0/roms/u-boot/doc/ |
| H A D | README.mpc85xxcds | 4 The CDS family of boards consists of a PCI backplane called the
9 applies to the 85xx CDS boards as well. In particular the toolchain,
21 The 85xx CDS code base is known to compile using:
29 platform to allow for utilization of all 85xx CDS devices. The memory
31 configured for MPC85xx CDS has been updated to reflect the new memory
54 The CDS board has two flash banks, each 8MB in size (2^23 = 0x00800000).
113 When using PCI, linux needs to know to which slot the CDS carrier is
119 SW2=xxxxxx00 PCI SLOT INFORM: The CDS carrier is in slot0 of the Arcadia
120 xxxxxx01 PCI SLOT INFORM: The CDS carrier is in slot1 of the Arcadia
121 xxxxxx10 PCI SLOT INFORM: The CDS carrier is in slot2 of the Arcadia
[all …]
|
| /dports/emulators/qemu5/qemu-5.2.0/roms/u-boot-sam460ex/doc/ |
| H A D | README.mpc85xxcds | 4 The CDS family of boards consists of a PCI backplane called the
9 applies to the 85xx CDS boards as well. In particular the toolchain,
21 The 85xx CDS code base is known to compile using:
29 platform to allow for utilization of all 85xx CDS devices. The memory
31 configured for MPC85xx CDS has been updated to reflect the new memory
54 The CDS board has two flash banks, each 8MB in size (2^23 = 0x00800000).
113 When using PCI, linux needs to know to which slot the CDS carrier is
119 SW2=xxxxxx00 PCI SLOT INFORM: The CDS carrier is in slot0 of the Arcadia
120 xxxxxx01 PCI SLOT INFORM: The CDS carrier is in slot1 of the Arcadia
121 xxxxxx10 PCI SLOT INFORM: The CDS carrier is in slot2 of the Arcadia
[all …]
|
| /dports/sysutils/u-boot-olinuxino-lime/u-boot-2021.07/doc/ |
| H A D | README.mpc85xxcds | 4 The CDS family of boards consists of a PCI backplane called the
9 applies to the 85xx CDS boards as well. In particular the toolchain,
21 The 85xx CDS code base is known to compile using:
29 platform to allow for utilization of all 85xx CDS devices. The memory
31 configured for MPC85xx CDS has been updated to reflect the new memory
54 The CDS board has two flash banks, each 8MB in size (2^23 = 0x00800000).
113 When using PCI, linux needs to know to which slot the CDS carrier is
119 SW2=xxxxxx00 PCI SLOT INFORM: The CDS carrier is in slot0 of the Arcadia
120 xxxxxx01 PCI SLOT INFORM: The CDS carrier is in slot1 of the Arcadia
121 xxxxxx10 PCI SLOT INFORM: The CDS carrier is in slot2 of the Arcadia
[all …]
|
| /dports/sysutils/u-boot-olinuxino-lime2-emmc/u-boot-2021.07/doc/ |
| H A D | README.mpc85xxcds | 4 The CDS family of boards consists of a PCI backplane called the
9 applies to the 85xx CDS boards as well. In particular the toolchain,
21 The 85xx CDS code base is known to compile using:
29 platform to allow for utilization of all 85xx CDS devices. The memory
31 configured for MPC85xx CDS has been updated to reflect the new memory
54 The CDS board has two flash banks, each 8MB in size (2^23 = 0x00800000).
113 When using PCI, linux needs to know to which slot the CDS carrier is
119 SW2=xxxxxx00 PCI SLOT INFORM: The CDS carrier is in slot0 of the Arcadia
120 xxxxxx01 PCI SLOT INFORM: The CDS carrier is in slot1 of the Arcadia
121 xxxxxx10 PCI SLOT INFORM: The CDS carrier is in slot2 of the Arcadia
[all …]
|
| /dports/sysutils/u-boot-olinuxino-lime2/u-boot-2021.07/doc/ |
| H A D | README.mpc85xxcds | 4 The CDS family of boards consists of a PCI backplane called the
9 applies to the 85xx CDS boards as well. In particular the toolchain,
21 The 85xx CDS code base is known to compile using:
29 platform to allow for utilization of all 85xx CDS devices. The memory
31 configured for MPC85xx CDS has been updated to reflect the new memory
54 The CDS board has two flash banks, each 8MB in size (2^23 = 0x00800000).
113 When using PCI, linux needs to know to which slot the CDS carrier is
119 SW2=xxxxxx00 PCI SLOT INFORM: The CDS carrier is in slot0 of the Arcadia
120 xxxxxx01 PCI SLOT INFORM: The CDS carrier is in slot1 of the Arcadia
121 xxxxxx10 PCI SLOT INFORM: The CDS carrier is in slot2 of the Arcadia
[all …]
|
| /dports/emulators/qemu-guest-agent/qemu-5.0.1/roms/u-boot-sam460ex/doc/ |
| H A D | README.mpc85xxcds | 4 The CDS family of boards consists of a PCI backplane called the
9 applies to the 85xx CDS boards as well. In particular the toolchain,
21 The 85xx CDS code base is known to compile using:
29 platform to allow for utilization of all 85xx CDS devices. The memory
31 configured for MPC85xx CDS has been updated to reflect the new memory
54 The CDS board has two flash banks, each 8MB in size (2^23 = 0x00800000).
113 When using PCI, linux needs to know to which slot the CDS carrier is
119 SW2=xxxxxx00 PCI SLOT INFORM: The CDS carrier is in slot0 of the Arcadia
120 xxxxxx01 PCI SLOT INFORM: The CDS carrier is in slot1 of the Arcadia
121 xxxxxx10 PCI SLOT INFORM: The CDS carrier is in slot2 of the Arcadia
[all …]
|
| /dports/emulators/qemu-powernv/qemu-powernv-3.0.50/roms/u-boot-sam460ex/doc/ |
| H A D | README.mpc85xxcds | 4 The CDS family of boards consists of a PCI backplane called the
9 applies to the 85xx CDS boards as well. In particular the toolchain,
21 The 85xx CDS code base is known to compile using:
29 platform to allow for utilization of all 85xx CDS devices. The memory
31 configured for MPC85xx CDS has been updated to reflect the new memory
54 The CDS board has two flash banks, each 8MB in size (2^23 = 0x00800000).
113 When using PCI, linux needs to know to which slot the CDS carrier is
119 SW2=xxxxxx00 PCI SLOT INFORM: The CDS carrier is in slot0 of the Arcadia
120 xxxxxx01 PCI SLOT INFORM: The CDS carrier is in slot1 of the Arcadia
121 xxxxxx10 PCI SLOT INFORM: The CDS carrier is in slot2 of the Arcadia
[all …]
|
| /dports/sysutils/u-boot-cubox-hummingboard/u-boot-2021.07/doc/ |
| H A D | README.mpc85xxcds | 4 The CDS family of boards consists of a PCI backplane called the
9 applies to the 85xx CDS boards as well. In particular the toolchain,
21 The 85xx CDS code base is known to compile using:
29 platform to allow for utilization of all 85xx CDS devices. The memory
31 configured for MPC85xx CDS has been updated to reflect the new memory
54 The CDS board has two flash banks, each 8MB in size (2^23 = 0x00800000).
113 When using PCI, linux needs to know to which slot the CDS carrier is
119 SW2=xxxxxx00 PCI SLOT INFORM: The CDS carrier is in slot0 of the Arcadia
120 xxxxxx01 PCI SLOT INFORM: The CDS carrier is in slot1 of the Arcadia
121 xxxxxx10 PCI SLOT INFORM: The CDS carrier is in slot2 of the Arcadia
[all …]
|
| /dports/sysutils/u-boot-cubieboard2/u-boot-2021.07/doc/ |
| H A D | README.mpc85xxcds | 4 The CDS family of boards consists of a PCI backplane called the
9 applies to the 85xx CDS boards as well. In particular the toolchain,
21 The 85xx CDS code base is known to compile using:
29 platform to allow for utilization of all 85xx CDS devices. The memory
31 configured for MPC85xx CDS has been updated to reflect the new memory
54 The CDS board has two flash banks, each 8MB in size (2^23 = 0x00800000).
113 When using PCI, linux needs to know to which slot the CDS carrier is
119 SW2=xxxxxx00 PCI SLOT INFORM: The CDS carrier is in slot0 of the Arcadia
120 xxxxxx01 PCI SLOT INFORM: The CDS carrier is in slot1 of the Arcadia
121 xxxxxx10 PCI SLOT INFORM: The CDS carrier is in slot2 of the Arcadia
[all …]
|
| /dports/sysutils/u-boot-cubieboard/u-boot-2021.07/doc/ |
| H A D | README.mpc85xxcds | 4 The CDS family of boards consists of a PCI backplane called the
9 applies to the 85xx CDS boards as well. In particular the toolchain,
21 The 85xx CDS code base is known to compile using:
29 platform to allow for utilization of all 85xx CDS devices. The memory
31 configured for MPC85xx CDS has been updated to reflect the new memory
54 The CDS board has two flash banks, each 8MB in size (2^23 = 0x00800000).
113 When using PCI, linux needs to know to which slot the CDS carrier is
119 SW2=xxxxxx00 PCI SLOT INFORM: The CDS carrier is in slot0 of the Arcadia
120 xxxxxx01 PCI SLOT INFORM: The CDS carrier is in slot1 of the Arcadia
121 xxxxxx10 PCI SLOT INFORM: The CDS carrier is in slot2 of the Arcadia
[all …]
|
| /dports/sysutils/u-boot-firefly-rk3399/u-boot-2021.07/doc/ |
| H A D | README.mpc85xxcds | 4 The CDS family of boards consists of a PCI backplane called the
9 applies to the 85xx CDS boards as well. In particular the toolchain,
21 The 85xx CDS code base is known to compile using:
29 platform to allow for utilization of all 85xx CDS devices. The memory
31 configured for MPC85xx CDS has been updated to reflect the new memory
54 The CDS board has two flash banks, each 8MB in size (2^23 = 0x00800000).
113 When using PCI, linux needs to know to which slot the CDS carrier is
119 SW2=xxxxxx00 PCI SLOT INFORM: The CDS carrier is in slot0 of the Arcadia
120 xxxxxx01 PCI SLOT INFORM: The CDS carrier is in slot1 of the Arcadia
121 xxxxxx10 PCI SLOT INFORM: The CDS carrier is in slot2 of the Arcadia
[all …]
|
| /dports/sysutils/u-boot-sinovoip-bpi-m3/u-boot-2021.07/doc/ |
| H A D | README.mpc85xxcds | 4 The CDS family of boards consists of a PCI backplane called the
9 applies to the 85xx CDS boards as well. In particular the toolchain,
21 The 85xx CDS code base is known to compile using:
29 platform to allow for utilization of all 85xx CDS devices. The memory
31 configured for MPC85xx CDS has been updated to reflect the new memory
54 The CDS board has two flash banks, each 8MB in size (2^23 = 0x00800000).
113 When using PCI, linux needs to know to which slot the CDS carrier is
119 SW2=xxxxxx00 PCI SLOT INFORM: The CDS carrier is in slot0 of the Arcadia
120 xxxxxx01 PCI SLOT INFORM: The CDS carrier is in slot1 of the Arcadia
121 xxxxxx10 PCI SLOT INFORM: The CDS carrier is in slot2 of the Arcadia
[all …]
|