Searched refs:ajSeqGetBegin (Results 26 – 49 of 49) sorted by relevance
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| /dports/biology/emboss/EMBOSS-6.6.0/emboss/ |
| H A D | wobble.c | 96 beg = ajSeqGetBegin(seq); in main()
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| H A D | pepdigest.c | 116 be = ajSeqGetBegin(a); in main()
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| H A D | pepinfo.c | 130 seq_begin = ajSeqGetBegin(inseq); in main()
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| H A D | banana.c | 115 ibeg = ajSeqGetBegin(seq); in main()
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| H A D | prettyseq.c | 101 beg = ajSeqGetBegin(a); in main()
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| H A D | showpep.c | 173 begin = ajSeqGetBegin(seq)-1; in main()
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| H A D | dan.c | 408 begin = ajSeqGetBegin(seq); in dan_reportgc()
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| H A D | sirna.c | 487 begin = ajSeqGetBegin(seq)-1; in sirna_begin()
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| H A D | showorf.c | 130 beg = ajSeqGetBegin(a); in main()
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| H A D | recoder.c | 174 begin = ajSeqGetBegin(seq); /* seq start posn, or 1 */ in main()
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| H A D | silent.c | 170 begin = ajSeqGetBegin(seq); /* returns the seq start posn, or 1 in main()
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| H A D | epestfind.c | 365 begin = ajSeqGetBegin(seq); in main()
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| H A D | showseq.c | 282 begin = ajSeqGetBegin(seq)-1; in main()
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| H A D | showfeat.c | 139 beg = ajSeqGetBegin(seq)-1; in main()
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| H A D | diffseq.c | 324 ajSeqGetBegin(seq2), ajSeqGetEnd(seq2)); in diffseq_Diff()
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| H A D | remap.c | 202 begin = ajSeqGetBegin(seq)-1; in main()
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| H A D | prima.c | 259 begin = ajSeqGetBegin(sequence); in main()
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| /dports/biology/emboss/EMBOSS-6.6.0/ajax/core/ |
| H A D | ajreport.c | 885 ajSeqGetBegin(seq) + ajSeqGetOffset(seq)); in reportWriteDraw()
998 ajSeqGetBegin(seq) + ajSeqGetOffset(seq)); in reportWriteRestrict()
2588 seqbeg = ajSeqGetBegin(seq) + ajSeqGetOffset(seq); in reportWriteTagseq()
3393 ajSeqGetBegin(seq) + ajSeqGetOffset(seq), in ajReportWriteHeader()
3398 ajSeqGetBegin(seq) + ajSeqGetOffset(seq), in ajReportWriteHeader()
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| H A D | ajrange.c | 1934 ajSeqGetBegin(s), ajSeqGetEnd(s)); in ajRangeIsWhole()
1941 ajSeqGetBegin(s), ajSeqGetEnd(s)); in ajRangeIsWhole()
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| H A D | ajseq.c | 2746 ajuint ajSeqGetBegin(const AjPSeq seq) in ajSeqGetBegin() function
2913 i = 1 +ajCvtSposToPosStart(ajSeqGetLen(seq), ajSeqGetBegin(seq)-1, i); in ajSeqGetEnd()
3126 return ajSeqGetEnd(seq) - ajSeqGetBegin(seq) + 1 ; in ajSeqGetLenTrimmed()
4464 ajDebug( " Begin: %d\n", ajSeqGetBegin(seq)); in ajSeqTrace()
12262 return ajSeqGetBegin(seq); in ajSeqBegin()
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| H A D | ajseq.h | 170 ajuint ajSeqGetBegin(const AjPSeq seq);
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| H A D | ajalign.c | 4469 thys->Start[iseq] = ajSeqGetBegin(seq); in alignDataSetSequence()
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| H A D | ajseqwrite.c | 10098 ibegin = ajSeqGetBegin(seq); in seqClone()
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| /dports/biology/emboss/EMBOSS-6.6.0/ajax/acd/ |
| H A D | ajacd.c | 14419 ajStrFromInt(&thys->SetStr[ACD_SEQ_BEGIN], ajSeqGetBegin(val)); in acdSetSeq()
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