| /dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/ |
| H A D | hts.c | 1626 #define META_BIN(idx) ((idx)->n_bins + 1)
1650 int fmt, min_shift, n_lvls, n_bins; member
1738 idx->n_bins = ((1<<(3 * n_lvls + 3)) - 1) / 7; in hts_idx_init()
1776 if ( kh_key(bidx, k) < idx->n_bins ) in update_loff()
1803 … if (!kh_exist(bidx, k) || kh_key(bidx, k) >= idx->n_bins || kh_key(bidx, k) < start) continue; in compress_binning()
1833 if (!kh_exist(bidx, k) || kh_key(bidx, k) >= idx->n_bins) continue; in compress_binning()
2638 if (bin >= idx->n_bins) bin = 0; in hts_itr_query()
2807 if (bin >= idx->n_bins) bin = 0; in hts_itr_multi_bam()
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| /dports/science/py-OpenMC/openmc-0.12.2/docs/source/io_formats/ |
| H A D | statepoint.rst | 97 - **n_bins** (*int*) -- Number of bins for the j-th filter. Not
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| /dports/science/openmc/openmc-0.12.2/docs/source/io_formats/ |
| H A D | statepoint.rst | 97 - **n_bins** (*int*) -- Number of bins for the j-th filter. Not
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| /dports/misc/py-xgboost/xgboost-1.5.1/src/tree/ |
| H A D | updater_gpu_hist.cu | 87 void Init(int device_id, int n_bins) { in Init() argument
88 this->n_bins_ = n_bins; in Init()
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| /dports/misc/xgboost/xgboost-1.5.1/src/tree/ |
| H A D | updater_gpu_hist.cu | 87 void Init(int device_id, int n_bins) { in Init() argument
88 this->n_bins_ = n_bins; in Init()
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| /dports/math/py-yt/yt-4.0.1/yt/data_objects/ |
| H A D | data_containers.py | 1113 n_bins=64, argument
1190 n_bins,
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| /dports/science/py-scikit-learn/scikit-learn-1.0.2/sklearn/inspection/tests/ |
| H A D | test_permutation_importance.py | 313 binner = KBinsDiscretizer(n_bins=3, encode="ordinal")
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| /dports/math/py-yt/yt-4.0.1/doc/source/analyzing/ |
| H A D | saving_data.rst | 167 n_bins=(128, 128))
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/pubseq_gateway/server/ |
| H A D | pubseq_gateway.ini | 108 n_bins=24 key
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| /dports/science/rdkit/rdkit-Release_2021_03_5/Code/GraphMol/MolAlign/ |
| H A D | O3AAlignMolecules.cpp | 625 void *data, const unsigned int n_bins) { in computeCostMatrix() argument
660 for (k = 0, hSum = 0.0; k < n_bins; ++k) { in computeCostMatrix()
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| /dports/math/py-yt/yt-4.0.1/doc/source/cookbook/ |
| H A D | fits_xray_images.ipynb | 185 " n_bins=30, weight_field=\"ones\")\n",
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| H A D | fits_radio_cubes.ipynb | 322 …lePlot(dd, (\"fits\", \"temperature\"), [(\"index\", \"ones\")], weight_field=None, n_bins=128)\n",
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| /dports/textproc/senna/senna-1.1.5/lib/ |
| H A D | inv.c | 2050 int n_bins; member
2066 h->n_bins = max; in cursor_heap_open()
2076 if (h->n_entries >= h->n_bins) { in cursor_heap_push()
2077 int max = h->n_bins * 2; in cursor_heap_push()
2081 h->n_bins = max; in cursor_heap_push()
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| /dports/biology/subread/subread-2.0.2-source/src/ |
| H A D | sambam-file.c | 2315 int n_bins = (*bins_list)->numOfElements; in SamBam_write_BAI_for_1chr() local
2319 fwrite(&n_bins, 4, 1, writer -> BAI_fp); in SamBam_write_BAI_for_1chr()
2321 for(bini = 0; bini < n_bins; bini ++){ in SamBam_write_BAI_for_1chr()
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| /dports/cad/sumo/sumo-1.2.0/tools/contributed/sumopy/coremodules/misc/ |
| H A D | matplottools.py | 643 bins = self.n_bins
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| /dports/science/ascent/ascent-0.7.1-66-gbcf2742a/src/ascent/runtimes/expressions/ |
| H A D | ascent_expression_filters.cpp | 2936 const conduit::Node *n_bins = input<Node>("num_bins"); in execute() local
2955 if(!n_bins->dtype().is_empty()) in execute()
2957 num_bins = (*n_bins)["value"].as_int32(); in execute()
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| /dports/science/py-OpenMC/openmc-0.12.2/src/tallies/ |
| H A D | tally.cpp | 376 stride *= model::tally_filters[filters_[i]]->n_bins(); in set_filters()
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| /dports/science/openmc/openmc-0.12.2/src/tallies/ |
| H A D | tally.cpp | 376 stride *= model::tally_filters[filters_[i]]->n_bins(); in set_filters()
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| /dports/graphics/py-scikit-image/scikit-image-0.19.0/skimage/filters/rank/tests/ |
| H A D | test_rank.py | 821 image=image8, footprint=elem, mask=mask, n_bins=5
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| /dports/science/py-scikit-learn/scikit-learn-1.0.2/doc/modules/ |
| H A D | preprocessing.rst | 727 >>> est = preprocessing.KBinsDiscretizer(n_bins=[3, 2, 2], encode='ordinal').fit(X)
970 ``encode='onehot-dense'`` and ``n_bins = n_knots - 1`` if
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| /dports/math/gretl/gretl-2021d/lib/src/ |
| H A D | describe.c | 2130 static int check_freq_opts (gretlopt opt, int *n_bins, in check_freq_opts() argument
2148 *n_bins = n; in check_freq_opts()
2249 int n_bins = 0; in freqdist() local
2273 err = check_freq_opts(opt, &n_bins, &fmin, &fwid); in freqdist()
2281 freq = get_freq(varno, dset, fmin, fwid, n_bins, 1, fopt, &err); in freqdist()
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| /dports/math/py-yt/yt-4.0.1/doc/source/visualizing/ |
| H A D | plots.rst | 1297 profiles.append(yt.create_profile(sphere, ["radius"], fields=[("gas", "density")], n_bins=64))
1299 yt.create_profile(sphere, ["radius"], fields=["dark_matter_density"], n_bins=64)
1550 n_bins=[128, 128],
1834 n_bins=800,
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| /dports/graphics/opencv/opencv-4.5.3/modules/imgproc/include/opencv2/ |
| H A D | imgproc.hpp | 1336 double log_eps = 0, double density_th = 0.7, int n_bins = 1024);
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| /dports/math/unuran/unuran-1.8.1/src/ |
| H A D | unuran.h | 198 int unur_distr_cemp_set_hist_bins( UNUR_DISTR *distribution, const double *bins, int n_bins );
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| /dports/math/py-numpy/numpy-1.20.3/doc/source/release/ |
| H A D | 1.15.0-notes.rst | 326 No longer does an IQR of 0 result in ``n_bins=1``, rather the number of bins
|