/dports/science/rdkit/rdkit-Release_2021_03_5/Code/GraphMol/MolStandardize/ |
H A D | testTautomer.cpp | 24 std::string rdbase = getenv("RDBASE"); in testEnumerator() local 26 rdbase + "/Data/MolStandardize/tautomerTransforms.in"; in testEnumerator() 700 std::string rdbase = getenv("RDBASE"); in testCanonicalize() local 702 rdbase + "/Data/MolStandardize/tautomerTransforms.in"; in testCanonicalize() 731 std::string rdbase = getenv("RDBASE"); in testPickCanonical() local 733 rdbase + "/Data/MolStandardize/tautomerTransforms.in"; in testPickCanonical() 765 std::string rdbase = getenv("RDBASE"); in testCustomScoreFunc() local 843 std::string rdbase = getenv("RDBASE"); in testEnumerationProblems() local 885 std::string rdbase = getenv("RDBASE"); in testPickCanonical2() local 929 std::string rdbase = getenv("RDBASE"); in testEnumerateDetails() local [all …]
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H A D | test1.cpp | 274 std::string rdbase = getenv("RDBASE"); in testNormalize() local 276 rdbase + "/Data/MolStandardize/normalizations.txt"; in testNormalize() 409 std::string rdbase = getenv("RDBASE"); in testNormalizeMultiFrags() local 411 rdbase + "/Data/MolStandardize/normalizations.txt"; in testNormalizeMultiFrags()
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H A D | Validate.cpp | 75 std::string rdbase = rdbase_cstr != nullptr ? rdbase_cstr : ""; in run() local 76 std::string fgrpFile = rdbase + "/Data/MolStandardize/fragmentPatterns.txt"; in run()
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/dports/emulators/qemu/qemu-6.2.0/hw/intc/ |
H A D | arm_gicv3_its.c | 236 uint64_t rdbase; in process_its_cmd() local 297 rdbase = (cte & GITS_CTE_RDBASE_PROCNUM_MASK) >> 1U; in process_its_cmd() 299 if (rdbase > s->gicv3->num_cpu) { in process_its_cmd() 304 gicv3_redist_process_lpi(&s->gicv3->cpu[rdbase], pIntid, 0); in process_its_cmd() 406 uint64_t rdbase) in update_cte() argument 423 cte = (valid & TABLE_ENTRY_VALID_MASK) | (rdbase << 1ULL); in update_cte() 470 uint64_t rdbase; in process_mapc() local 488 rdbase = (value & R_MAPC_RDBASE_MASK) >> R_MAPC_RDBASE_SHIFT; in process_mapc() 489 rdbase &= RDBASE_PROCNUM_MASK; in process_mapc() 496 "icid %d rdbase %" PRIu64 "\n", icid, rdbase); in process_mapc() [all …]
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/dports/emulators/qemu-devel/qemu-de8ed1055c2ce18c95f597eb10df360dcb534f99/hw/intc/ |
H A D | arm_gicv3_its.c | 236 uint64_t rdbase; 297 rdbase = (cte & GITS_CTE_RDBASE_PROCNUM_MASK) >> 1U; 299 if (rdbase > s->gicv3->num_cpu) { 304 gicv3_redist_process_lpi(&s->gicv3->cpu[rdbase], pIntid, 0); 406 uint64_t rdbase) 423 cte = (valid & TABLE_ENTRY_VALID_MASK) | (rdbase << 1ULL); 470 uint64_t rdbase; 488 rdbase = (value & R_MAPC_RDBASE_MASK) >> R_MAPC_RDBASE_SHIFT; 489 rdbase &= RDBASE_PROCNUM_MASK; 496 "icid %d rdbase %" PRIu64 "\n", icid, rdbase); [all …]
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/dports/emulators/libdsk/libdsk-1.4.2/lib/ |
H A D | drvcfi.c | 219 unsigned char *buf, *rdptr, *rdbase, *wrptr; in cfi_save_track() local 231 rdbase = t->cfit_data; /* -> start of current uncompressed block */ in cfi_save_track() 246 memcpy(wrptr + 2, rdbase, blklen); in cfi_save_track() 248 rdbase += blklen; in cfi_save_track() 256 rdbase = rdptr; in cfi_save_track() 273 memcpy(wrptr + 2, rdbase, blklen); in cfi_save_track()
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/dports/science/rdkit/rdkit-Release_2021_03_5/External/YAeHMOP/ |
H A D | EHTTools.cpp | 92 auto rdbase = std::getenv("RDBASE"); in runMol() local 93 if (rdbase != nullptr) { in runMol() 94 pfName += rdbase; in runMol()
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/dports/science/rdkit/rdkit-Release_2021_03_5/Code/GraphMol/Depictor/ |
H A D | testDepictor.cpp | 90 std::string rdbase = getenv("RDBASE"); in test1() local 92 rdbase + "/Code/GraphMol/Depictor/test_data/test1.out.sdf"; in test1() 122 std::string rdbase = getenv("RDBASE"); in testCollisions() local 124 rdbase + "/Code/GraphMol/Depictor/test_data/collisions.out.sdf"; in testCollisions() 177 std::string rdbase = getenv("RDBASE"); in test2() local 183 rdbase + "/Code/GraphMol/Depictor/test_data/first_200.out.sdf"; in test2() 201 std::string rdbase = getenv("RDBASE"); in test3() local 435 std::string rdbase = getenv("RDBASE"); in testRemoveHsCrash() local 437 rdbase + "/Code/GraphMol/Depictor/test_data/hs_crash.mol"; in testRemoveHsCrash() 832 std::string rdbase = getenv("RDBASE"); in testConstrainedCoords() local [all …]
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/dports/science/rdkit/rdkit-Release_2021_03_5/Code/SimDivPickers/ |
H A D | catch_tests.cpp | 38 std::string rdbase = getenv("RDBASE"); variable 40 rdbase + "/Code/SimDivPickers/Wrap/test_data/chembl_cyps.head.fps";
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/dports/science/rdkit/rdkit-Release_2021_03_5/Code/GraphMol/FileParsers/ |
H A D | testExtendedStereoParsing.cpp | 26 std::string rdbase = getenv("RDBASE"); in readTestFile() local 28 rdbase + "/Code/GraphMol/FileParsers/test_data/" + baseName; in readTestFile()
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/dports/science/rdkit/rdkit-Release_2021_03_5/External/CoordGen/ |
H A D | CoordGen.h | 63 auto rdbase = std::getenv("RDBASE"); variable 64 if (rdbase != nullptr) { 65 templateFileDir += rdbase;
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/dports/science/rdkit/rdkit-Release_2021_03_5/rdkit/Chem/ |
H A D | UnitTestMol3D.py | 373 rdbase = os.environ["RDBASE"] 374 filename = os.path.join(rdbase, 'Code/GraphMol/FileParsers/test_data/two_centers_or.mol') 388 rdbase = os.environ["RDBASE"] 389 filename = os.path.join(rdbase, 'Code/GraphMol/FileParsers/test_data/two_centers_or.mol') 438 rdbase = os.environ["RDBASE"] 439 filename = os.path.join(rdbase, 'Code/GraphMol/FileParsers/test_data/simple_either.mol')
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/dports/science/rdkit/rdkit-Release_2021_03_5/External/FreeSASA/ |
H A D | testFreeSASA.cpp | 355 std::string rdbase = getenv("RDBASE"); in testPDB() local 356 std::string fName = rdbase += "/External/FreeSASA/test_data/1d3z.pdb"; in testPDB()
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/dports/science/rdkit/rdkit-Release_2021_03_5/Code/GraphMol/ChemReactions/ |
H A D | testReaction.cpp | 582 std::string rdbase = getenv("RDBASE"); in test7MDLParser() local 1201 std::string rdbase = getenv("RDBASE"); in test11ChiralityRxn() local 2480 std::string rdbase = getenv("RDBASE"); in test24AtomFlags() local 2687 std::string rdbase = getenv("RDBASE"); in test26V3000MDLParser() local 4480 std::string rdbase = getenv("RDBASE"); in test47TestReactionMoleculeConversion() local 4485 fName = rdbase + "rxn1.mol"; in test47TestReactionMoleculeConversion() 4527 fName = rdbase + "rxn1_1.mol"; in test47TestReactionMoleculeConversion() 4545 fName = rdbase + "rxn1_2.mol"; in test47TestReactionMoleculeConversion() 6721 std::string rdbase = getenv("RDBASE"); in testGithub1950() local 6920 std::string rdbase = getenv("RDBASE"); in testGithub1868() local [all …]
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/dports/multimedia/v4l_compat/linux-5.13-rc2/drivers/irqchip/ |
H A D | irq-gic-v3-its.c | 1433 void __iomem *rdbase; in direct_lpi_inv() local 1454 gic_write_lpir(val, rdbase + GICR_INVLPIR); in direct_lpi_inv() 1456 wait_for_syncr(rdbase); in direct_lpi_inv() 3743 void __iomem *rdbase; in its_vpe_db_proxy_move() local 3747 wait_for_syncr(rdbase); in its_vpe_db_proxy_move() 3930 void __iomem *rdbase; in its_vpe_send_inv() local 3936 wait_for_syncr(rdbase); in its_vpe_send_inv() 3972 void __iomem *rdbase; in its_vpe_set_irqchip_state() local 3979 wait_for_syncr(rdbase); in its_vpe_set_irqchip_state() 4105 void __iomem *rdbase; in its_vpe_4_1_invall() local [all …]
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/dports/multimedia/libv4l/linux-5.13-rc2/drivers/irqchip/ |
H A D | irq-gic-v3-its.c | 1433 void __iomem *rdbase; in direct_lpi_inv() local 1454 gic_write_lpir(val, rdbase + GICR_INVLPIR); in direct_lpi_inv() 1456 wait_for_syncr(rdbase); in direct_lpi_inv() 3743 void __iomem *rdbase; in its_vpe_db_proxy_move() local 3747 wait_for_syncr(rdbase); in its_vpe_db_proxy_move() 3930 void __iomem *rdbase; in its_vpe_send_inv() local 3936 wait_for_syncr(rdbase); in its_vpe_send_inv() 3972 void __iomem *rdbase; in its_vpe_set_irqchip_state() local 3979 wait_for_syncr(rdbase); in its_vpe_set_irqchip_state() 4105 void __iomem *rdbase; in its_vpe_4_1_invall() local [all …]
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/dports/multimedia/v4l-utils/linux-5.13-rc2/drivers/irqchip/ |
H A D | irq-gic-v3-its.c | 1433 void __iomem *rdbase; in direct_lpi_inv() local 1454 gic_write_lpir(val, rdbase + GICR_INVLPIR); in direct_lpi_inv() 1456 wait_for_syncr(rdbase); in direct_lpi_inv() 3743 void __iomem *rdbase; in its_vpe_db_proxy_move() local 3747 wait_for_syncr(rdbase); in its_vpe_db_proxy_move() 3930 void __iomem *rdbase; in its_vpe_send_inv() local 3936 wait_for_syncr(rdbase); in its_vpe_send_inv() 3972 void __iomem *rdbase; in its_vpe_set_irqchip_state() local 3979 wait_for_syncr(rdbase); in its_vpe_set_irqchip_state() 4105 void __iomem *rdbase; in its_vpe_4_1_invall() local [all …]
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/dports/science/rdkit/rdkit-Release_2021_03_5/Code/GraphMol/ |
H A D | hanoitest.cpp | 974 std::string rdbase = getenv("RDBASE"); in test7a() local 977 std::string fName = rdbase + "/Code/GraphMol/test_data/canon_reorder1.mol"; in test7a() 993 std::string fName = rdbase + "/Code/GraphMol/test_data/canon_reorder2.mol"; in test7a() 1233 std::string rdbase = getenv("RDBASE"); in test8() local 1235 std::string fName = rdbase + "/Code/GraphMol/test_data/iChi1b.mol"; in test8() 1312 std::string rdbase = getenv("RDBASE"); in test9() local 1516 std::string rdbase = getenv("RDBASE"); in test12() local 1519 rdbase + "/Code/GraphMol/FileParsers/test_data/2FVD.pdb"; in test12()
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H A D | test1.cpp | 1198 std::string rdbase = getenv("RDBASE"); in testAtomListLineRoundTrip() local 1199 std::string fName = rdbase + "/Code/GraphMol/test_data/m_als_round_trip.mol"; in testAtomListLineRoundTrip()
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/dports/science/rdkit/rdkit-Release_2021_03_5/Code/GraphMol/Descriptors/ |
H A D | test3D.cpp | 379 std::string rdbase = getenv("RDBASE"); in test3DVals() local 382 rdbase + "/Code/GraphMol/MolTransforms/test_data/github1262_1.mol"; in test3DVals() 400 rdbase + "/Code/GraphMol/MolTransforms/test_data/github1262_2.mol"; in test3DVals() 419 rdbase + "/Code/GraphMol/MolTransforms/test_data/github1262_3.mol"; in test3DVals()
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H A D | test.cpp | 2034 std::string rdbase = getenv("RDBASE"); in testUSRDescriptor() local 2036 rdbase + "/Code/GraphMol/Descriptors/test_data/cyclohexane.mol"; in testUSRDescriptor() 2106 std::string rdbase = getenv("RDBASE"); in testUSRCATDescriptor() local 2108 rdbase + "/Code/GraphMol/Descriptors/test_data/cyclohexane.mol"; in testUSRCATDescriptor()
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/dports/science/rdkit/rdkit-Release_2021_03_5/Code/GraphMol/MolChemicalFeatures/ |
H A D | testFeatures.cpp | 448 std::string rdbase = getenv("RDBASE"); in test7() local 450 rdbase + "/Code/GraphMol/MolChemicalFeatures/test_data/featDef.txt"; in test7() 630 std::string rdbase = getenv("RDBASE"); in testIssue346() local 632 rdbase + "/Code/GraphMol/MolChemicalFeatures/test_data/featDef2.txt"; in testIssue346()
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/dports/science/rdkit/rdkit-Release_2021_03_5/Code/GraphMol/MolDraw2D/Wrap/ |
H A D | testMolDraw2D.py | 491 rdbase = environ['RDBASE'] 492 if rdbase: 493 do.fontFile = '{}/Code/GraphMol/MolDraw2D/Amadeus.ttf'.format(rdbase)
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/dports/lang/swi-pl/swipl-8.2.3/src/ |
H A D | pl-read.c | 424 #define rdbase (_PL_rd->base) macro 470 { if ( rdbase && rdbase != rb.fast ) in free_read_data() 471 PL_free(rdbase); in free_read_data() 575 s=rdbase; in ptr_to_location() 589 { s = rdbase; in ptr_to_location() 629 PL_UTF8_STRING, rdbase, in unify_location() 832 rdbase = rb.here = rb.base; in clearBuffer() 834 _PL_rd->posp = rdbase; in clearBuffer() 848 _PL_rd->posp = rdbase = rb.base; in growToBuffer() 2488 PL_INTPTR, (intptr_t)(start-rdbase), in get_quasi_quotation() [all …]
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/dports/science/rdkit/rdkit-Release_2021_03_5/Code/GraphMol/FMCS/ |
H A D | testFMCS_Unit.cpp | 567 std::string rdbase = getenv("RDBASE"); in testJnk1LigandsDistance() local 569 std::string fn(rdbase + jnk1sdf); in testJnk1LigandsDistance()
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